4YGF | pdb_00004ygf

Crystal structure of the complex of Helicobacter pylori alpha-Carbonic Anhydrase with acetazolamide

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
H	d4ygfh_	All beta proteins	Carbonic anhydrase	Carbonic anhydrase	automated matches	automated matches	(Helicobacter pylori 26695 ) [TaxId: 85962 ],	SCOPe (2.08)
G	d4ygfg_	All beta proteins	Carbonic anhydrase	Carbonic anhydrase	automated matches	automated matches	(Helicobacter pylori 26695 ) [TaxId: 85962 ],	SCOPe (2.08)
F	d4ygff_	All beta proteins	Carbonic anhydrase	Carbonic anhydrase	automated matches	automated matches	(Helicobacter pylori 26695 ) [TaxId: 85962 ],	SCOPe (2.08)
E	d4ygfe_	All beta proteins	Carbonic anhydrase	Carbonic anhydrase	automated matches	automated matches	(Helicobacter pylori 26695 ) [TaxId: 85962 ],	SCOPe (2.08)
D	d4ygfd_	All beta proteins	Carbonic anhydrase	Carbonic anhydrase	automated matches	automated matches	(Helicobacter pylori 26695 ) [TaxId: 85962 ],	SCOPe (2.08)
C	d4ygfc_	All beta proteins	Carbonic anhydrase	Carbonic anhydrase	automated matches	automated matches	(Helicobacter pylori 26695 ) [TaxId: 85962 ],	SCOPe (2.08)
B	d4ygfb_	All beta proteins	Carbonic anhydrase	Carbonic anhydrase	automated matches	automated matches	(Helicobacter pylori 26695 ) [TaxId: 85962 ],	SCOPe (2.08)
A	d4ygfa_	All beta proteins	Carbonic anhydrase	Carbonic anhydrase	automated matches	automated matches	(Helicobacter pylori 26695 ) [TaxId: 85962 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
H	SCOP2B Superfamily	Carbonic anhydrase	8065137	3001672	SCOP2B (2022-06-29)
G	SCOP2 Family	Carbonic anhydrase	8065136	4002732	SCOP2 (2022-06-29)
G	SCOP2 Superfamily	Carbonic anhydrase	8065137	3001672	SCOP2 (2022-06-29)
F	SCOP2B Superfamily	Carbonic anhydrase	8065137	3001672	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Carbonic anhydrase	8065137	3001672	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Carbonic anhydrase	8065137	3001672	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Carbonic anhydrase	8065137	3001672	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Carbonic anhydrase	8065137	3001672	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Carbonic anhydrase	8065137	3001672	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
H	V-set	e4ygfH1	A: alpha bundles	X: Ribosomal protein S7	H: HypA Ni-binding domain	T: HypA Ni-binding domain	F: V-set	ECOD (develop294)
G	V-set	e4ygfG1	A: alpha bundles	X: Ribosomal protein S7	H: HypA Ni-binding domain	T: HypA Ni-binding domain	F: V-set	ECOD (develop294)
F	V-set	e4ygfF1	A: alpha bundles	X: Ribosomal protein S7	H: HypA Ni-binding domain	T: HypA Ni-binding domain	F: V-set	ECOD (develop294)
E	V-set	e4ygfE1	A: alpha bundles	X: Ribosomal protein S7	H: HypA Ni-binding domain	T: HypA Ni-binding domain	F: V-set	ECOD (develop294)
D	V-set	e4ygfD1	A: alpha bundles	X: Ribosomal protein S7	H: HypA Ni-binding domain	T: HypA Ni-binding domain	F: V-set	ECOD (develop294)
C	V-set	e4ygfC1	A: alpha bundles	X: Ribosomal protein S7	H: HypA Ni-binding domain	T: HypA Ni-binding domain	F: V-set	ECOD (develop294)
B	V-set	e4ygfB1	A: alpha bundles	X: Ribosomal protein S7	H: HypA Ni-binding domain	T: HypA Ni-binding domain	F: V-set	ECOD (develop294)
A	V-set	e4ygfA1	A: alpha bundles	X: Ribosomal protein S7	H: HypA Ni-binding domain	T: HypA Ni-binding domain	F: V-set	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
H	3.10.200.10	Alpha Beta	Roll	Carbonic Anhydrase II	Alpha carbonic anhydrase	CATH (4.3.0)
G	3.10.200.10	Alpha Beta	Roll	Carbonic Anhydrase II	Alpha carbonic anhydrase	CATH (4.3.0)
F	3.10.200.10	Alpha Beta	Roll	Carbonic Anhydrase II	Alpha carbonic anhydrase	CATH (4.3.0)
E	3.10.200.10	Alpha Beta	Roll	Carbonic Anhydrase II	Alpha carbonic anhydrase	CATH (4.3.0)
D	3.10.200.10	Alpha Beta	Roll	Carbonic Anhydrase II	Alpha carbonic anhydrase	CATH (4.3.0)
C	3.10.200.10	Alpha Beta	Roll	Carbonic Anhydrase II	Alpha carbonic anhydrase	CATH (4.3.0)
B	3.10.200.10	Alpha Beta	Roll	Carbonic Anhydrase II	Alpha carbonic anhydrase	CATH (4.3.0)
A	3.10.200.10	Alpha Beta	Roll	Carbonic Anhydrase II	Alpha carbonic anhydrase	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H	Alpha-carbonic anhydrase	cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding carbonate dehydratase activity hydro-lyase activity lyase activity catalytic activity carbon-oxygen lyase activity	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H	IPR041891	Carbonic anhydrase, prokaryotic-like	Family
A, B, C, D, E A, B, C, D, E, F, G, H	IPR001148	Alpha carbonic anhydrase domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR036398	Alpha carbonic anhydrase domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR023561	Carbonic anhydrase, alpha-class	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.