4YN0
Crystal structure of APP E2 domain in complex with DR6 CRD domain
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d4yn0b_ | All alpha proteins | STAT-like | CAPPD, an extracellular domain of amyloid beta A4 protein | automated matches | automated matches | Mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | TNFR_c6 | e4yn0A2 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: TNF receptor-like | F: TNFR_c6 | ECOD (1.6) |
A | TNFRSF11A_2nd | e4yn0A3 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: TNF receptor-like | F: TNFRSF11A_2nd | ECOD (1.6) |
A | TNFRSF21 | e4yn0A4 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: TNF receptor-like | F: TNFRSF21 | ECOD (1.6) |
A | UNK_F_TYPE | e4yn0A1 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: TNF receptor-like | F: UNK_F_TYPE | ECOD (1.6) |
B | APP_E2 | e4yn0B1 | A: alpha bundles | X: STAT-like | H: CAPPD, an extracellular domain of amyloid beta A4 protein (From Topology) | T: CAPPD, an extracellular domain of amyloid beta A4 protein | F: APP_E2 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.10.50.10 | Mainly Beta | Ribbon | Tumor Necrosis Factor Receptor, subunit A | domain 2 | CATH (4.3.0) |
B | 1.20.120.770 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | Amyloid precursor protein, E2 domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00020 | TNFR/NGFR cysteine-rich region (TNFR_c6) | TNFR/NGFR cysteine-rich region | Domain | ||