5B0W | pdb_00005b0w

Crystal structure of the 11-cis isomer of pharaonis halorhodopsin in the absence of halide ions

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
F [auth G]	d5b0wg_	Membrane and cell surface proteins and peptides	Class A G protein-coupled receptor (GPCR)-like	Class A G protein-coupled receptor (GPCR)-like	automated matches	automated matches	(Natronomonas pharaonis DSM 2160 ) [TaxId: 348780 ],	SCOPe (2.08)
E [auth F]	d5b0wf_	Membrane and cell surface proteins and peptides	Class A G protein-coupled receptor (GPCR)-like	Class A G protein-coupled receptor (GPCR)-like	automated matches	automated matches	(Natronomonas pharaonis DSM 2160 ) [TaxId: 348780 ],	SCOPe (2.08)
D [auth E]	d5b0we_	Membrane and cell surface proteins and peptides	Class A G protein-coupled receptor (GPCR)-like	Class A G protein-coupled receptor (GPCR)-like	automated matches	automated matches	(Natronomonas pharaonis DSM 2160 ) [TaxId: 348780 ],	SCOPe (2.08)
C [auth D]	d5b0wd_	Membrane and cell surface proteins and peptides	Class A G protein-coupled receptor (GPCR)-like	Class A G protein-coupled receptor (GPCR)-like	automated matches	automated matches	(Natronomonas pharaonis DSM 2160 ) [TaxId: 348780 ],	SCOPe (2.08)
B	d5b0wb_	Membrane and cell surface proteins and peptides	Class A G protein-coupled receptor (GPCR)-like	Class A G protein-coupled receptor (GPCR)-like	automated matches	automated matches	(Natronomonas pharaonis DSM 2160 ) [TaxId: 348780 ],	SCOPe (2.08)
A	d5b0wa_	Membrane and cell surface proteins and peptides	Class A G protein-coupled receptor (GPCR)-like	Class A G protein-coupled receptor (GPCR)-like	automated matches	automated matches	(Natronomonas pharaonis DSM 2160 ) [TaxId: 348780 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
F [auth G]	zf-C3HC4_2	e5b0wG1	A: alpha bundles	X: Rossmann-like	H: RIFT-related	T: acid protease	F: zf-C3HC4_2	ECOD (develop294)
E [auth F]	zf-C3HC4_2	e5b0wF1	A: alpha bundles	X: Rossmann-like	H: RIFT-related	T: acid protease	F: zf-C3HC4_2	ECOD (develop294)
D [auth E]	zf-C3HC4_2	e5b0wE1	A: alpha bundles	X: Rossmann-like	H: RIFT-related	T: acid protease	F: zf-C3HC4_2	ECOD (develop294)
C [auth D]	zf-C3HC4_2	e5b0wD1	A: alpha bundles	X: Rossmann-like	H: RIFT-related	T: acid protease	F: zf-C3HC4_2	ECOD (develop294)
B	zf-C3HC4_2	e5b0wB1	A: alpha bundles	X: Rossmann-like	H: RIFT-related	T: acid protease	F: zf-C3HC4_2	ECOD (develop294)
A	zf-C3HC4_2	e5b0wA1	A: alpha bundles	X: Rossmann-like	H: RIFT-related	T: acid protease	F: zf-C3HC4_2	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
F [auth G]	1.20.1070.10	Mainly Alpha	Up-down Bundle	Rhopdopsin 7-helix transmembrane proteins	Rhodopsin 7-helix transmembrane proteins	CATH (4.3.0)
E [auth F]	1.20.1070.10	Mainly Alpha	Up-down Bundle	Rhopdopsin 7-helix transmembrane proteins	Rhodopsin 7-helix transmembrane proteins	CATH (4.3.0)
D [auth E]	1.20.1070.10	Mainly Alpha	Up-down Bundle	Rhopdopsin 7-helix transmembrane proteins	Rhodopsin 7-helix transmembrane proteins	CATH (4.3.0)
C [auth D]	1.20.1070.10	Mainly Alpha	Up-down Bundle	Rhopdopsin 7-helix transmembrane proteins	Rhodopsin 7-helix transmembrane proteins	CATH (4.3.0)
B	1.20.1070.10	Mainly Alpha	Up-down Bundle	Rhopdopsin 7-helix transmembrane proteins	Rhodopsin 7-helix transmembrane proteins	CATH (4.3.0)
A	1.20.1070.10	Mainly Alpha	Up-down Bundle	Rhopdopsin 7-helix transmembrane proteins	Rhodopsin 7-helix transmembrane proteins	CATH (4.3.0)

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.