5CSK | pdb_00005csk

Crystal structure of yeast acetyl-CoA carboxylase, unbiotinylated


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyGlutathione synthetase ATP-binding domain-like 8043361 3000094 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyRudiment single hybrid motif 8043358 3001910 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyPreATP-grasp domain 8043359 3001680 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyClpP/crotonase 8035309 3000033 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyClpP/crotonase 8035307 3000033 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyPreATP-grasp domain 8043359 3001680 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyGlutathione synthetase ATP-binding domain-like 8043361 3000094 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyClpP/crotonase 8035309 3000033 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyClpP/crotonase 8035307 3000033 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyRudiment single hybrid motif 8043358 3001910 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Ae5cskA1 A: CCHC-type 1 zinc fingerX: LEM/SAP HeH motifH: LEM/SAP HeH motifT: GP120F:ECOD (20:10:01)
Be5cskB1 A: CCHC-type 1 zinc fingerX: LEM/SAP HeH motifH: LEM/SAP HeH motifT: GP120F:ECOD (20:10:01)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF21385Acetyl-CoA carboxylase, BT domain (ACCA_BT)Acetyl-CoA carboxylase, BT domainThis is the BC-CT interaction domain (BT) which is between the BC (biotin carboxylase, which catalyses the MgATP-dependent carboxylation of N1' atom of biotin) and BCCP (biotin carboxyl carrier protein) domains of Acetyl-CoA carboxylase. This domain ...This is the BC-CT interaction domain (BT) which is between the BC (biotin carboxylase, which catalyses the MgATP-dependent carboxylation of N1' atom of biotin) and BCCP (biotin carboxyl carrier protein) domains of Acetyl-CoA carboxylase. This domain helps to mediate interactions between the BC and CT (carboxyltransferase) domains [1-3].
Domain
A, B
PF02786Carbamoyl-phosphate synthase L chain, ATP binding domain (CPSase_L_D2)Carbamoyl-phosphate synthase L chain, ATP binding domainCarbamoyl-phosphate synthase catalyses the ATP-dependent synthesis of carbamyl-phosphate from glutamine or ammonia and bicarbonate. This important enzyme initiates both the urea cycle and the biosynthesis of arginine and/or pyrimidines [2]. The c ...Carbamoyl-phosphate synthase catalyses the ATP-dependent synthesis of carbamyl-phosphate from glutamine or ammonia and bicarbonate. This important enzyme initiates both the urea cycle and the biosynthesis of arginine and/or pyrimidines [2]. The carbamoyl-phosphate synthase (CPS) enzyme in prokaryotes is a heterodimer of a small and large chain. The small chain promotes the hydrolysis of glutamine to ammonia, which is used by the large chain to synthesise carbamoyl phosphate. See Pfam:PF00988. The small chain has a GATase domain in the carboxyl terminus. See Pfam:PF00117. The ATP binding domain (this one) has an ATP-grasp fold.
Domain
A, B
PF02785Biotin carboxylase C-terminal domain (Biotin_carb_C)Biotin carboxylase C-terminal domainBiotin carboxylase is a component of the acetyl-CoA carboxylase multi-component enzyme which catalyses the first committed step in fatty acid synthesis in animals, plants and bacteria. Most of the active site residues reported in reference [1] are in ...Biotin carboxylase is a component of the acetyl-CoA carboxylase multi-component enzyme which catalyses the first committed step in fatty acid synthesis in animals, plants and bacteria. Most of the active site residues reported in reference [1] are in this C-terminal domain.
Domain
A, B
PF00289Biotin carboxylase, N-terminal domain (Biotin_carb_N)Biotin carboxylase, N-terminal domainThis domain is structurally related to the PreATP-grasp domain. The family contains the N-terminus of biotin carboxylase enzymes [1,3], and propionyl-CoA carboxylase A chain [2]. Domain
A, B
PF01039Carboxyl transferase domain (Carboxyl_trans)Carboxyl transferase domain- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Acetyl-CoA carboxylase