5H5V

Crystal structure of the flagellar cap protein FliD D1-D2-D3 domains from Escherichia coli

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	FliD_C_1st_1	e5h5vA3	A: beta sandwiches	X: Flagellar hook-associated protein 1 beta-sandwich domains (From Topology)	H: Flagellar hook-associated protein 1 beta-sandwich domains (From Topology)	T: Flagellar hook-associated protein 1 beta-sandwich domains	F: FliD_C_1st_1	ECOD (1.6)
A	Flagellin_IN	e5h5vA1	A: beta sandwiches	X: gp11/flagellar cap protein FliD insertion domain (From Topology)	H: gp11/flagellar cap protein FliD insertion domain (From Topology)	T: gp11/flagellar cap protein FliD insertion domain	F: Flagellin_IN	ECOD (1.6)
A	FliD_C_2nd	e5h5vA2	A: alpha bundles	X: Four-helical up-and-down bundle	H: Flagellar cap protein FliD helical bundle domain (From Topology)	T: Flagellar cap protein FliD helical bundle domain	F: FliD_C_2nd	ECOD (1.6)
B	FliD_C_1st_1	e5h5vB2	A: beta sandwiches	X: Flagellar hook-associated protein 1 beta-sandwich domains (From Topology)	H: Flagellar hook-associated protein 1 beta-sandwich domains (From Topology)	T: Flagellar hook-associated protein 1 beta-sandwich domains	F: FliD_C_1st_1	ECOD (1.6)
B	Flagellin_IN	e5h5vB1	A: beta sandwiches	X: gp11/flagellar cap protein FliD insertion domain (From Topology)	H: gp11/flagellar cap protein FliD insertion domain (From Topology)	T: gp11/flagellar cap protein FliD insertion domain	F: Flagellin_IN	ECOD (1.6)
B	FliD_C_2nd	e5h5vB3	A: alpha bundles	X: Four-helical up-and-down bundle	H: Flagellar cap protein FliD helical bundle domain (From Topology)	T: Flagellar cap protein FliD helical bundle domain	F: FliD_C_2nd	ECOD (1.6)
C	FliD_C_1st_1	e5h5vC1	A: beta sandwiches	X: Flagellar hook-associated protein 1 beta-sandwich domains (From Topology)	H: Flagellar hook-associated protein 1 beta-sandwich domains (From Topology)	T: Flagellar hook-associated protein 1 beta-sandwich domains	F: FliD_C_1st_1	ECOD (1.6)
C	Flagellin_IN	e5h5vC2	A: beta sandwiches	X: gp11/flagellar cap protein FliD insertion domain (From Topology)	H: gp11/flagellar cap protein FliD insertion domain (From Topology)	T: gp11/flagellar cap protein FliD insertion domain	F: Flagellin_IN	ECOD (1.6)
C	FliD_C_2nd	e5h5vC3	A: alpha bundles	X: Four-helical up-and-down bundle	H: Flagellar cap protein FliD helical bundle domain (From Topology)	T: Flagellar cap protein FliD helical bundle domain	F: FliD_C_2nd	ECOD (1.6)
D	FliD_C_1st_1	e5h5vD3	A: beta sandwiches	X: Flagellar hook-associated protein 1 beta-sandwich domains (From Topology)	H: Flagellar hook-associated protein 1 beta-sandwich domains (From Topology)	T: Flagellar hook-associated protein 1 beta-sandwich domains	F: FliD_C_1st_1	ECOD (1.6)
D	Flagellin_IN	e5h5vD1	A: beta sandwiches	X: gp11/flagellar cap protein FliD insertion domain (From Topology)	H: gp11/flagellar cap protein FliD insertion domain (From Topology)	T: gp11/flagellar cap protein FliD insertion domain	F: Flagellin_IN	ECOD (1.6)
D	FliD_C_2nd	e5h5vD2	A: alpha bundles	X: Four-helical up-and-down bundle	H: Flagellar cap protein FliD helical bundle domain (From Topology)	T: Flagellar cap protein FliD helical bundle domain	F: FliD_C_2nd	ECOD (1.6)
E	FliD_C_1st_1	e5h5vE1	A: beta sandwiches	X: Flagellar hook-associated protein 1 beta-sandwich domains (From Topology)	H: Flagellar hook-associated protein 1 beta-sandwich domains (From Topology)	T: Flagellar hook-associated protein 1 beta-sandwich domains	F: FliD_C_1st_1	ECOD (1.6)
E	Flagellin_IN	e5h5vE3	A: beta sandwiches	X: gp11/flagellar cap protein FliD insertion domain (From Topology)	H: gp11/flagellar cap protein FliD insertion domain (From Topology)	T: gp11/flagellar cap protein FliD insertion domain	F: Flagellin_IN	ECOD (1.6)
E	FliD_C_2nd	e5h5vE2	A: alpha bundles	X: Four-helical up-and-down bundle	H: Flagellar cap protein FliD helical bundle domain (From Topology)	T: Flagellar cap protein FliD helical bundle domain	F: FliD_C_2nd	ECOD (1.6)
F	FliD_C_1st_1	e5h5vF3	A: beta sandwiches	X: Flagellar hook-associated protein 1 beta-sandwich domains (From Topology)	H: Flagellar hook-associated protein 1 beta-sandwich domains (From Topology)	T: Flagellar hook-associated protein 1 beta-sandwich domains	F: FliD_C_1st_1	ECOD (1.6)
F	Flagellin_IN	e5h5vF2	A: beta sandwiches	X: gp11/flagellar cap protein FliD insertion domain (From Topology)	H: gp11/flagellar cap protein FliD insertion domain (From Topology)	T: gp11/flagellar cap protein FliD insertion domain	F: Flagellin_IN	ECOD (1.6)
F	FliD_C_2nd	e5h5vF1	A: alpha bundles	X: Four-helical up-and-down bundle	H: Flagellar cap protein FliD helical bundle domain (From Topology)	T: Flagellar cap protein FliD helical bundle domain	F: FliD_C_2nd	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F	PF07195	Flagellar hook-associated protein 2 C-terminus (FliD_C)	Flagellar hook-associated protein 2 C-terminus	-	Family
A, B, C, D, E A, B, C, D, E, F	PF02465	Flagellar hook-associated protein 2 N-terminus (FliD_N)	Flagellar hook-associated protein 2 N-terminus	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F	Flagellar hook-associated protein 2	-	bacterial-type flagellum-dependent cell motility cellular process cell motility archaeal or bacterial-type flagellum-dependent cell motility cilium or flagellum-dependent cell motility cell adhesion	bacterial-type flagellum filament cap cell projection cellular anatomical structure organelle membraneless organelle bacterial-type flagellum filament bacterial-type flagellum extracellular region bacterial-type flagellum hook

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR040026	Flagellar hook-associated protein 2	Family
A, B, C, D, E A, B, C, D, E, F	IPR010809	Flagellar hook-associated protein 2, C-terminal	Domain
A, B, C, D, E A, B, C, D, E, F	IPR003481	Flagellar hook-associated protein 2, N-terminal	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.