5HKO | pdb_00005hko

Crystal structure of ABC transporter Solute Binding Protein MSMEG_3598 from Mycobacterium smegmatis str. MC2 155, target EFI-510969, in complex with L-sorbitol

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyType 1 solute binding protein-like 8097002 3000125 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AIBR_2e5hkoA1 A: alpha bundlesX: HhH/H2THH: Head and neck region of the ectodomain of paramyxoviruses fusion glycoproteinT: Head and neck region of the ectodomain of paramyxoviruses fusion glycoproteinF: IBR_2ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.40.50.2300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Response regulatorCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF13407Periplasmic binding protein domain (Peripla_BP_4)Periplasmic binding protein domain- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
ABC transporter, carbohydrate uptake transporter-2 (CUT2) family, periplasmic sugar-binding protein

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR025997Periplasmic binding proteinDomain
IPR028082Periplasmic binding protein-like IHomologous Superfamily