Crystal structure of the alanine racemase Bsu17640 from Bacillus subtilis
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | e5irpA1 | A: Immunoglobulin-like beta-sandwich | X: Immunoglobulin-related | H: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | T: C1-set | F: | ECOD (20:10:01) | |
| B | e5irpB1 | A: Immunoglobulin-like beta-sandwich | X: Immunoglobulin-related | H: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | T: C1-set | F: | ECOD (20:10:01) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 2.40.37.10 | Mainly Beta | Beta Barrel | Lyase, Ornithine Decarboxylase | Chain A, domain 1 | CATH (4.3.0) |
| A | 3.20.20.10 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Alanine racemase | CATH (4.3.0) |
| B | 2.40.37.10 | Mainly Beta | Beta Barrel | Lyase, Ornithine Decarboxylase | Chain A, domain 1 | CATH (4.3.0) |
| B | 3.20.20.10 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Alanine racemase | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00842 | Alanine racemase, C-terminal domain (Ala_racemase_C) | Alanine racemase, C-terminal domain | Domain | ||
| PF01168 | Alanine racemase, N-terminal domain (Ala_racemase_N) | Alanine racemase, N-terminal domain | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR029066 | PLP-binding barrel | Homologous Superfamily | |
| IPR009006 | Alanine racemase/group IV decarboxylase, C-terminal | Homologous Superfamily | |
| IPR020622 | Alanine racemase, pyridoxal-phosphate attachment site | Binding Site | |
| IPR011079 | Alanine racemase, C-terminal | Domain | |
| IPR001608 | Alanine racemase, N-terminal | Domain | |
| IPR000821 | Alanine racemase | Family |














