5IWM | pdb_00005iwm

2.5A structure of GSK945237 with S.aureus DNA gyrase and DNA.


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
D [auth C]e5iwmC1 A: omega toxin-likeX: omega toxin-relatedH: omega toxin-relatedT:F:ECOD (20:10:01)
B [auth A]e5iwmA1 A: Chlorophyll a-b binding proteinX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: AhpC-TSAF:ECOD (20:10:01)
C [auth D]e5iwmD1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Ribosomal_S5_CF:ECOD (20:10:01)
A [auth B]e5iwmB1 A: Nat/IvyX: Acyl-CoA N-acyltransferases (Nat)H: Acyl-CoA N-acyltransferases (Nat)T: Ribosomal_S5_CF:ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
C [auth D]3.40.50.670 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold CATH (utative)
A [auth B]3.40.50.670 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold CATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
DNA (5'-D(*TP*GP*TP*GP*CP*GP*GP*TP*GP*AP*AP*CP*CP*TP*AP*CP*GP*GP*CP*T)-3')---
DNA (5'-D(*AP*GP*CP*CP*GP*TP*AP*GP*GP*TP*TP*CP*AP*CP*CP*GP*CP*AP*CP*A)-3')---
B [auth A],
D [auth C]
DNA gyrase subunit A
A [auth B],
C [auth D]
DNA gyrase subunit B,DNA gyrase subunit B

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B [auth A],
D [auth C]
IPR035516DNA gyrase/topoisomerase IV, subunit A, C-terminalHomologous Superfamily
B [auth A],
D [auth C]
IPR050220Type II DNA TopoisomerasesFamily
B [auth A],
D [auth C]
IPR013760DNA topoisomerase, type IIA-like domain superfamilyHomologous Superfamily
B [auth A],
D [auth C]
IPR013757DNA topoisomerase, type IIA, alpha-helical domain superfamilyHomologous Superfamily
B [auth A],
D [auth C]
IPR013758DNA topoisomerase, type IIA, domain A, alpha-betaHomologous Superfamily
B [auth A],
D [auth C]
IPR005743DNA gyrase, subunit AFamily
B [auth A],
D [auth C]
IPR006691DNA gyrase/topoisomerase IV, subunit A, C-terminal repeatRepeat
B [auth A],
D [auth C]
IPR002205DNA topoisomerase, type IIA, domain ADomain
A [auth B],
C [auth D]
IPR011557DNA gyrase, subunit BFamily
A [auth B],
C [auth D]
IPR034160DNA gyrase subunit B, TOPRIM domainDomain
A [auth B],
C [auth D]
IPR018522DNA topoisomerase, type IIA, conserved siteConserved Site
A [auth B],
C [auth D]
IPR013506DNA topoisomerase, type IIA, subunit B, domain 2Domain
A [auth B],
C [auth D]
IPR013760DNA topoisomerase, type IIA-like domain superfamilyHomologous Superfamily
A [auth B],
C [auth D]
IPR036890Histidine kinase/HSP90-like ATPase superfamilyHomologous Superfamily
A [auth B],
C [auth D]
IPR006171TOPRIM domainDomain
A [auth B],
C [auth D]
IPR000565DNA topoisomerase, type IIA, subunit BFamily
A [auth B],
C [auth D]
IPR003594Histidine kinase/HSP90-like ATPase domainDomain
A [auth B],
C [auth D]
IPR013759DNA topoisomerase, type IIA, subunit B, C-terminalHomologous Superfamily
A [auth B],
C [auth D]
IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
A [auth B],
C [auth D]
IPR001241DNA topoisomerase, type IIAFamily
A [auth B],
C [auth D]
IPR002288DNA gyrase B subunit, C-terminalDomain
A [auth B],
C [auth D]
IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily