5J9I | pdb_00005j9i

Crystal structure of the HigA2 antitoxin C-terminal domain

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
H	AARP2CN	e5j9iH1	A: alpha bundles	X: Spectrin repeat-like	H: Spectrin repeat	T: Spectrin repeat	F: AARP2CN	ECOD (develop294)
G	AARP2CN	e5j9iG1	A: alpha bundles	X: Spectrin repeat-like	H: Spectrin repeat	T: Spectrin repeat	F: AARP2CN	ECOD (develop294)
F	AARP2CN	e5j9iF1	A: alpha bundles	X: Spectrin repeat-like	H: Spectrin repeat	T: Spectrin repeat	F: AARP2CN	ECOD (develop294)
E	AARP2CN	e5j9iE1	A: alpha bundles	X: Spectrin repeat-like	H: Spectrin repeat	T: Spectrin repeat	F: AARP2CN	ECOD (develop294)
D	AARP2CN	e5j9iD1	A: alpha bundles	X: Spectrin repeat-like	H: Spectrin repeat	T: Spectrin repeat	F: AARP2CN	ECOD (develop294)
C	AARP2CN	e5j9iC1	A: alpha bundles	X: Spectrin repeat-like	H: Spectrin repeat	T: Spectrin repeat	F: AARP2CN	ECOD (develop294)
B	AARP2CN	e5j9iB1	A: alpha bundles	X: Spectrin repeat-like	H: Spectrin repeat	T: Spectrin repeat	F: AARP2CN	ECOD (develop294)
A	AARP2CN	e5j9iA1	A: alpha bundles	X: Spectrin repeat-like	H: Spectrin repeat	T: Spectrin repeat	F: AARP2CN	ECOD (develop294)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H	Antitoxin igA-2	sequence-specific DNA binding DNA binding binding nucleic acid binding	regulation of cellular process RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of biological process biological regulation primary metabolic process regulation of cellular process RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of biological process biological regulation primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression biosynthetic process cellular process metabolic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription macromolecule metabolic process regulation of metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H	IPR032758	Antitoxin MqsA/HigA-2	Family
A, B, C, D, E A, B, C, D, E, F, G, H	IPR052359	Bacterial HTH-type regulators and antitoxins	Family
A, B, C, D, E A, B, C, D, E, F, G, H	IPR001387	Cro/C1-type, helix-turn-helix domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR010982	Lambda repressor-like, DNA-binding domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.