5JAA | pdb_00005jaa

Crystal structure of the HigBA2 toxin-antitoxin complex


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DV-sete5jaaD1 A: alpha bundlesX: Spectrin repeat-likeH: Spectrin repeatT: Spectrin repeatF: V-setECOD (develop294)
CV-sete5jaaC1 A: alpha bundlesX: Spectrin repeat-likeH: Spectrin repeatT: Spectrin repeatF: V-setECOD (develop294)
AMqsA_antitoxine5jaaA1 A: alpha bundlesX: HTHH: HTHT: tetra-helical, lambda repressor-likeF: MqsA_antitoxinECOD (develop294)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C, D
PF06296RelE toxin of RelE / RelB toxin-antitoxin system (RelE)RelE toxin of RelE / RelB toxin-antitoxin systemRelE is a family of Gram-negative bacterial antitoxins of the RelE/RelB toxin-antitoxin system. Its cognate antitoxin is family RelB, Pfam:PF04221. Domain
A, B
PF15731Antitoxin component of bacterial toxin-antitoxin system, MqsA (MqsA_antitoxin)Antitoxin component of bacterial toxin-antitoxin system, MqsAMqsA_antitoxin is a family of prokaryotic proteins that act as antidotes to the mRNA interferase MqsR. It has a zinc-binding at the very N-terminus indicating its DNA-binding capacity. MqsR is the gene most highly upregulated in E. Colo MqsR_toxin i ...MqsA_antitoxin is a family of prokaryotic proteins that act as antidotes to the mRNA interferase MqsR. It has a zinc-binding at the very N-terminus indicating its DNA-binding capacity. MqsR is the gene most highly upregulated in E. Colo MqsR_toxin is a family of bacterial toxins that act as an mRNA interferase. MqsR is the gene most highly upregulated in E. coli persister cells [2] and it plays an essential role in biofilm regulation [3] and cell signalling [4]. It forms part of a bacterial toxin-antitoxin TA system, and as expected for a TA system, the expression of the MqsR toxin leads to growth arrest, while co-expression with its antitoxin, MqsA, rescues the growth arrest phenotype. In addition, MqsR associates with MqsA to form a tight, non-toxic complex and both MqsA alone and the MqsR:MqsA2:MqsR complex bind and regulate the mqsR promoter. The structure of MqsR shows that is is a member of the RelE/YoeB family of bacterial RNases that are structurally and functionally characterised bacterial toxins [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C, D
Toxin HigB-2- - -
A, B
Antitoxin igA-2 -