5KAV
The structure of SAV2435
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Cass2 | e5kavA1 | A: a+b duplicates or obligate multimers | X: Probable bacterial effector-binding domain (From Topology) | H: Probable bacterial effector-binding domain (From Topology) | T: Probable bacterial effector-binding domain | F: Cass2 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.20.80.10 | Alpha Beta | Alpha-Beta Barrel | Multidrug-efflux Transporter 1 Regulator Bmrr | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF14526 | Integron-associated effector binding protein (Cass2) | Integron-associated effector binding protein | This family contains Cass2 from Vibrio cholerae, an integron-associated protein that has been shown [1] to bind cationic drug compounds with submicromolar affinity. Cass2 has been proposed to be representative of a larger family of independent effect ... | Domain |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR010499 | Bacterial transcription activator, effector binding | Domain | |
IPR029441 | Integron-associated effector binding protein | Domain | |
IPR053182 | Putative transcriptional regulator YobU-like | Family | |
IPR011256 | Regulatory factor, effector binding domain superfamily | Homologous Superfamily |