5LFJ | pdb_00005lfj

Crystal Structure of the Bacterial Proteasome Activator Bpa of Mycobacterium tuberculosis

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	Proteasome activator-like	8090964	3001611	SCOP2B (2022-06-29)
C	SCOP2 Family	Bpa-like	8045564	4004536	SCOP2 (2022-06-29)
C	SCOP2 Superfamily	Proteasome activator-like	8090964	3001611	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	Proteasome activator-like	8090964	3001611	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Proteasome activator-like	8090964	3001611	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	Fer4, Fer4_7, Fer4_10	e5lfjD1	A: alpha bundles	X: Rossmann-like	H: Rossmann-related	T: Aha1/BPI domain-like	F: Fer4, Fer4_7, Fer4_10	ECOD (develop294)
C	Fer4, Fer4_7, Fer4_10	e5lfjC1	A: alpha bundles	X: Rossmann-like	H: Rossmann-related	T: Aha1/BPI domain-like	F: Fer4, Fer4_7, Fer4_10	ECOD (develop294)
B	Fer4, Fer4_7, Fer4_10	e5lfjB1	A: alpha bundles	X: Rossmann-like	H: Rossmann-related	T: Aha1/BPI domain-like	F: Fer4, Fer4_7, Fer4_10	ECOD (develop294)
A	Fer4, Fer4_7, Fer4_10	e5lfjA1	A: alpha bundles	X: Rossmann-like	H: Rossmann-related	T: Aha1/BPI domain-like	F: Fer4, Fer4_7, Fer4_10	ECOD (develop294)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF10759	Bacterial proteasome activator (BPA)	Bacterial proteasome activator	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Bacterial proteasome activator	protein-containing complex binding binding proteasome binding	cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein complex oligomerization protein-containing complex assembly protein homooligomerization cellular process cellular component organization or biogenesis positive regulation of proteasomal protein catabolic process regulation of cellular process catabolic process positive regulation of protein metabolic process positive regulation of biological process cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein complex oligomerization protein-containing complex assembly protein homooligomerization cellular process cellular component organization or biogenesis positive regulation of proteasomal protein catabolic process regulation of cellular process catabolic process positive regulation of protein metabolic process positive regulation of biological process macromolecule catabolic process regulation of primary metabolic process positive regulation of metabolic process positive regulation of macromolecule metabolic process protein metabolic process positive regulation of cellular process regulation of biological process regulation of protein metabolic process biological regulation primary metabolic process proteasomal protein catabolic process regulation of macromolecule metabolic process protein catabolic process regulation of catabolic process positive regulation of protein catabolic process positive regulation of catabolic process regulation of proteasomal protein catabolic process metabolic process macromolecule metabolic process regulation of metabolic process regulation of protein catabolic process	proteasome accessory complex protein-containing complex intracellular anatomical structure cellular anatomical structure catalytic complex peptidase complex proteasome complex endopeptidase complex intracellular protein-containing complex cell periphery plasma membrane membrane external encapsulating structure cell wall proteasome accessory complex protein-containing complex intracellular anatomical structure cellular anatomical structure catalytic complex peptidase complex proteasome complex endopeptidase complex intracellular protein-containing complex cell periphery plasma membrane membrane external encapsulating structure cell wall peptidoglycan-based cell wall

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR019695	Bacterial proteasome activator	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

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