5LTS
Crystal structure of Lymphocytic choriomeningitis mammarenavirus endonuclease Mutant D118A
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | ArenaCapSnatch | e5ltsA1 | A: a/b three-layered sandwiches | X: Restriction endonuclease-like | H: Restriction endonuclease-like (From Topology) | T: Restriction endonuclease-like | F: ArenaCapSnatch | ECOD (1.6) |
B | ArenaCapSnatch | e5ltsB1 | A: a/b three-layered sandwiches | X: Restriction endonuclease-like | H: Restriction endonuclease-like (From Topology) | T: Restriction endonuclease-like | F: ArenaCapSnatch | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.70.2640 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | Arenavirus RNA polymerase | CATH (4.3.0) |
B | 3.30.70.2640 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | Arenavirus RNA polymerase | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF17296 | Arenavirus cap snatching domain (ArenaCapSnatch) | Arenavirus cap snatching domain | This domain represents the N-terminal domain of the Arenavirus polymerase that is involved in cap snatching during transcription initiation. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR007099 | RNA-directed RNA polymerase, negative-strand RNA virus | Domain | |
IPR010453 | RNA polymerase, arenaviral | Family | |
IPR026382 | RNA endonuclease, cap-snatching, arenaviral | Domain | |
IPR048006 | RNA endonuclease, cap-snatching, bunyaviral | Domain |