5MCX | pdb_00005mcx

The structure of the mature HIV-1 CA hexamer in intact virus particles

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
X [auth Y]e5mcxY1 A: alpha arraysX: F-type ATP synthase subunit bH: Bacterial cell wall synthesis membrane enzyme MraY-relatedT: Bacterial cell wall synthesis membrane enzyme MraY-relatedF:ECOD (v295.2)
W [auth Q]e5mcxQ1 A: alpha arraysX: F-type ATP synthase subunit bH: Bacterial cell wall synthesis membrane enzyme MraY-relatedT: Bacterial cell wall synthesis membrane enzyme MraY-relatedF:ECOD (v295.2)
V [auth O]e5mcxO1 A: alpha arraysX: F-type ATP synthase subunit bH: Bacterial cell wall synthesis membrane enzyme MraY-relatedT: Bacterial cell wall synthesis membrane enzyme MraY-relatedF:ECOD (v295.2)
U [auth P]e5mcxP1 A: alpha arraysX: F-type ATP synthase subunit bH: Bacterial cell wall synthesis membrane enzyme MraY-relatedT: Bacterial cell wall synthesis membrane enzyme MraY-relatedF:ECOD (v295.2)
T [auth N]e5mcxN1 A: alpha arraysX: F-type ATP synthase subunit bH: Bacterial cell wall synthesis membrane enzyme MraY-relatedT: Bacterial cell wall synthesis membrane enzyme MraY-relatedF:ECOD (v295.2)
S [auth L]e5mcxL1 A: alpha arraysX: F-type ATP synthase subunit bH: Bacterial cell wall synthesis membrane enzyme MraY-relatedT: Bacterial cell wall synthesis membrane enzyme MraY-relatedF:ECOD (v295.2)
R [auth S]e5mcxS1 A: alpha arraysX: F-type ATP synthase subunit bH: Bacterial cell wall synthesis membrane enzyme MraY-relatedT: Bacterial cell wall synthesis membrane enzyme MraY-relatedF:ECOD (v295.2)
Q [auth G]e5mcxG1 A: alpha arraysX: F-type ATP synthase subunit bH: Bacterial cell wall synthesis membrane enzyme MraY-relatedT: Bacterial cell wall synthesis membrane enzyme MraY-relatedF:ECOD (v295.2)
P [auth c]e5mcxc1 A: alpha arraysX: F-type ATP synthase subunit bH: Bacterial cell wall synthesis membrane enzyme MraY-relatedT: Bacterial cell wall synthesis membrane enzyme MraY-relatedF:ECOD (v295.2)
O [auth R]e5mcxR1 A: alpha arraysX: F-type ATP synthase subunit bH: Bacterial cell wall synthesis membrane enzyme MraY-relatedT: Bacterial cell wall synthesis membrane enzyme MraY-relatedF:ECOD (v295.2)
N [auth b]e5mcxb1 A: alpha arraysX: F-type ATP synthase subunit bH: Bacterial cell wall synthesis membrane enzyme MraY-relatedT: Bacterial cell wall synthesis membrane enzyme MraY-relatedF:ECOD (v295.2)
M [auth Z]e5mcxZ1 A: alpha arraysX: F-type ATP synthase subunit bH: Bacterial cell wall synthesis membrane enzyme MraY-relatedT: Bacterial cell wall synthesis membrane enzyme MraY-relatedF:ECOD (v295.2)
L [auth W]e5mcxW1 A: alpha arraysX: F-type ATP synthase subunit bH: Bacterial cell wall synthesis membrane enzyme MraY-relatedT: Bacterial cell wall synthesis membrane enzyme MraY-relatedF:ECOD (v295.2)
K [auth V]e5mcxV1 A: alpha arraysX: F-type ATP synthase subunit bH: Bacterial cell wall synthesis membrane enzyme MraY-relatedT: Bacterial cell wall synthesis membrane enzyme MraY-relatedF:ECOD (v295.2)
J [auth U]e5mcxU1 A: alpha arraysX: F-type ATP synthase subunit bH: Bacterial cell wall synthesis membrane enzyme MraY-relatedT: Bacterial cell wall synthesis membrane enzyme MraY-relatedF:ECOD (v295.2)
I [auth K]e5mcxK1 A: alpha arraysX: F-type ATP synthase subunit bH: Bacterial cell wall synthesis membrane enzyme MraY-relatedT: Bacterial cell wall synthesis membrane enzyme MraY-relatedF:ECOD (v295.2)
H [auth J]e5mcxJ1 A: alpha arraysX: F-type ATP synthase subunit bH: Bacterial cell wall synthesis membrane enzyme MraY-relatedT: Bacterial cell wall synthesis membrane enzyme MraY-relatedF:ECOD (v295.2)
G [auth I]e5mcxI1 A: alpha arraysX: F-type ATP synthase subunit bH: Bacterial cell wall synthesis membrane enzyme MraY-relatedT: Bacterial cell wall synthesis membrane enzyme MraY-relatedF:ECOD (v295.2)
Fe5mcxF1 A: alpha arraysX: F-type ATP synthase subunit bH: Bacterial cell wall synthesis membrane enzyme MraY-relatedT: Bacterial cell wall synthesis membrane enzyme MraY-relatedF:ECOD (v295.2)
Ee5mcxE1 A: alpha arraysX: F-type ATP synthase subunit bH: Bacterial cell wall synthesis membrane enzyme MraY-relatedT: Bacterial cell wall synthesis membrane enzyme MraY-relatedF:ECOD (v295.2)
De5mcxD1 A: alpha arraysX: F-type ATP synthase subunit bH: Bacterial cell wall synthesis membrane enzyme MraY-relatedT: Bacterial cell wall synthesis membrane enzyme MraY-relatedF:ECOD (v295.2)
Ce5mcxC1 A: alpha arraysX: F-type ATP synthase subunit bH: Bacterial cell wall synthesis membrane enzyme MraY-relatedT: Bacterial cell wall synthesis membrane enzyme MraY-relatedF:ECOD (v295.2)
Be5mcxB1 A: alpha arraysX: F-type ATP synthase subunit bH: Bacterial cell wall synthesis membrane enzyme MraY-relatedT: Bacterial cell wall synthesis membrane enzyme MraY-relatedF:ECOD (v295.2)
Ae5mcxA1 A: alpha arraysX: F-type ATP synthase subunit bH: Bacterial cell wall synthesis membrane enzyme MraY-relatedT: Bacterial cell wall synthesis membrane enzyme MraY-relatedF:ECOD (v295.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
B,
C,
D,
E,
Capsid protein p24

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
B,
C,
D,
E,
IPR000071Immunodeficiency lentiviral matrix, N-terminalDomain
A,
B,
C,
D,
E,
IPR045345Retroviral nucleocapsid Gag protein p24, C-terminal domainDomain
A,
B,
C,
D,
E,
IPR036875Zinc finger, CCHC-type superfamilyHomologous Superfamily
A,
B,
C,
D,
E,
IPR050195Primate lentivirus group Gag polyprotein-likeDomain
A,
B,
C,
D,
E,
IPR001878Zinc finger, CCHC-typeDomain
A,
B,
C,
D,
E,
IPR008919Retrovirus capsid, N-terminalHomologous Superfamily
A,
B,
C,
D,
E,
IPR010999Retroviral matrix proteinHomologous Superfamily
A,
B,
C,
D,
E,
IPR012344Matrix protein, lentiviral and alpha-retroviral, N-terminalHomologous Superfamily
A,
B,
C,
D,
E,
IPR008916Retrovirus capsid, C-terminalHomologous Superfamily