5MIN | pdb_00005min

Apo form of the soluble PQQ-dependent Glucose Dehydrogenase from Acinetobacter calcoaceticus

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d5minb_	All beta proteins	6-bladed beta-propeller	Soluble quinoprotein glucose dehydrogenase	Soluble quinoprotein glucose dehydrogenase	automated matches	(Acinetobacter calcoaceticus ) [TaxId: 471 ],	SCOPe (2.08)
A	d5mina_	All beta proteins	6-bladed beta-propeller	Soluble quinoprotein glucose dehydrogenase	Soluble quinoprotein glucose dehydrogenase	automated matches	(Acinetobacter calcoaceticus ) [TaxId: 471 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	GSDH-like	8042839	3001635	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	GSDH-like	8042839	3001635	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B		e5minB1	A: Cryptochrome/photolyase FAD-binding domain-related	X: Cryptochrome/photolyase FAD-binding domain-related	H: Undecaprenyl diphosphate synthase	T: Pkinase, ABC1	F:	ECOD (20:10:01)
A		e5minA1	A: P-loop domains-like	X: Cas7-related	H: CRISPR-associated protein Cas7f/Csy3	T: ATP-synt_VA_C	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	2.120.10.30	Mainly Beta	6 Propeller	Neuraminidase	TolB, C-terminal domain	CATH (4.3.0)
A	2.120.10.30	Mainly Beta	6 Propeller	Neuraminidase	TolB, C-terminal domain	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Quinoprotein glucose dehydrogenase B	oxidoreductase activity oxidoreductase activity, acting on CH-OH group of donors quinoprotein glucose dehydrogenase activity glucose dehydrogenase activity oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor catalytic activity cation binding ion binding binding metal ion binding small molecule binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR011042	Six-bladed beta-propeller, TolB-like	Homologous Superfamily
A, B	IPR011041	Soluble quinoprotein glucose/sorbosone dehydrogenase, beta-propeller domain superfamily	Homologous Superfamily
A, B	IPR012938	Glucose/Sorbosone dehydrogenase	Domain
A, B	IPR019893	PQQ-dependent dehydrogenase SndH-like	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.