26S proteasome in presence of ATP (s1)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| V [auth 1] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8036787 | 3000131 | SCOP2B (2022-06-29) |
| H [auth h] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8036787 | 3000131 | SCOP2B (2022-06-29) |
| U [auth G] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8079169 | 3000131 | SCOP2B (2022-06-29) |
| G [auth g] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8079169 | 3000131 | SCOP2B (2022-06-29) |
| F [auth f] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064066 | 3000131 | SCOP2B (2022-06-29) |
| T [auth F] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064066 | 3000131 | SCOP2B (2022-06-29) |
| S [auth E] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064026 | 3000131 | SCOP2B (2022-06-29) |
| E [auth e] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064026 | 3000131 | SCOP2B (2022-06-29) |
| R [auth D] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064012 | 3000131 | SCOP2B (2022-06-29) |
| D [auth d] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064012 | 3000131 | SCOP2B (2022-06-29) |
| Q [auth C] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064020 | 3000131 | SCOP2B (2022-06-29) |
| C [auth c] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064020 | 3000131 | SCOP2B (2022-06-29) |
| P [auth B] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064048 | 3000131 | SCOP2B (2022-06-29) |
| B [auth b] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064048 | 3000131 | SCOP2B (2022-06-29) |
| Z [auth 5] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8079504 | 3000131 | SCOP2B (2022-06-29) |
| L [auth l] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8079504 | 3000131 | SCOP2B (2022-06-29) |
| A [auth a] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8036842 | 3000131 | SCOP2B (2022-06-29) |
| O [auth A] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8036842 | 3000131 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| I [auth i] | e5mp9i1 | A: Ntn/PP2C | X: Ntn | H: Penicillin acylase, catalytic domain | T: PAS_9 | F: | ECOD (20:10:01) | |
| W [auth 2] | e5mp921 | A: Ntn/PP2C | X: Ntn | H: Penicillin acylase, catalytic domain | T: PAS_9 | F: | ECOD (20:10:01) | |
| V [auth 1] | e5mp911 | A: Ntn/PP2C | X: Ntn | H: Penicillin acylase, catalytic domain | T: PAS_9 | F: | ECOD (20:10:01) | |
| H [auth h] | e5mp9h1 | A: Ntn/PP2C | X: Ntn | H: Penicillin acylase, catalytic domain | T: PAS_9 | F: | ECOD (20:10:01) | |
| U [auth G] | e5mp9G1 | A: Ntn/PP2C | X: Ntn | H: Penicillin acylase, catalytic domain | T: PAS_9 | F: | ECOD (20:10:01) | |
| G [auth g] | e5mp9g1 | A: Ntn/PP2C | X: Ntn | H: Penicillin acylase, catalytic domain | T: PAS_9 | F: | ECOD (20:10:01) | |
| F [auth f] | e5mp9f1 | A: Ntn/PP2C | X: Ntn | H: Penicillin acylase, catalytic domain | T: PAS_9 | F: | ECOD (20:10:01) | |
| T [auth F] | e5mp9F1 | A: Ntn/PP2C | X: Ntn | H: Penicillin acylase, catalytic domain | T: PAS_9 | F: | ECOD (20:10:01) | |
| S [auth E] | e5mp9E1 | A: Ntn/PP2C | X: Ntn | H: Penicillin acylase, catalytic domain | T: PAS_9 | F: | ECOD (20:10:01) | |
| E [auth e] | e5mp9e1 | A: Ntn/PP2C | X: Ntn | H: Penicillin acylase, catalytic domain | T: PAS_9 | F: | ECOD (20:10:01) | |
| R [auth D] | e5mp9D1 | A: Ntn/PP2C | X: Ntn | H: Penicillin acylase, catalytic domain | T: PAS_9 | F: | ECOD (20:10:01) | |
| D [auth d] | e5mp9d1 | A: Ntn/PP2C | X: Ntn | H: Penicillin acylase, catalytic domain | T: PAS_9 | F: | ECOD (20:10:01) | |
| Q [auth C] | e5mp9C1 | A: Ntn/PP2C | X: Ntn | H: Penicillin acylase, catalytic domain | T: PAS_9 | F: | ECOD (20:10:01) | |
| C [auth c] | e5mp9c1 | A: Ntn/PP2C | X: Ntn | H: Penicillin acylase, catalytic domain | T: PAS_9 | F: | ECOD (20:10:01) | |
| P [auth B] | e5mp9B1 | A: Ntn/PP2C | X: Ntn | H: Penicillin acylase, catalytic domain | T: PAS_9 | F: | ECOD (20:10:01) | |
| B [auth b] | e5mp9b1 | A: Ntn/PP2C | X: Ntn | H: Penicillin acylase, catalytic domain | T: PAS_9 | F: | ECOD (20:10:01) | |
| GA [auth M] | e5mp9M1 | A: Cytochrome P450 | X: Cytochrome P450 | H: Cytochrome P450 | T: AP_endonuc_2 | F: | ECOD (20:10:01) | |
| FA [auth L] | e5mp9L1 | A: Ntn/PP2C | X: Ntn | H: Penicillin acylase, catalytic domain | T: PAS_9 | F: | ECOD (20:10:01) | |
| EA [auth K] | e5mp9K1 | A: Cytochrome P450 | X: Cytochrome P450 | H: Cytochrome P450 | T: AP_endonuc_2 | F: | ECOD (20:10:01) | |
| DA [auth I] | e5mp9I1 | A: Ntn/PP2C | X: Ntn | H: Penicillin acylase, catalytic domain | T: PAS_9 | F: | ECOD (20:10:01) | |
| CA [auth H] | e5mp9H3 | A: Ntn/PP2C | X: Ntn | H: Penicillin acylase, catalytic domain | T: PAS_9 | F: | ECOD (20:10:01) | |
| N [auth n] | e5mp9n1 | A: Ntn/PP2C | X: Ntn | H: Penicillin acylase, catalytic domain | T: PAS_9 | F: | ECOD (20:10:01) | |
| BA [auth 7] | e5mp971 | A: Ntn/PP2C | X: Ntn | H: Penicillin acylase, catalytic domain | T: PAS_9 | F: | ECOD (20:10:01) | |
| M [auth m] | e5mp9m1 | A: Ntn/PP2C | X: Ntn | H: Penicillin acylase, catalytic domain | T: PAS_9 | F: | ECOD (20:10:01) | |
| AA [auth 6] | e5mp961 | A: Ntn/PP2C | X: Ntn | H: Penicillin acylase, catalytic domain | T: PAS_9 | F: | ECOD (20:10:01) | |
| Z [auth 5] | e5mp951 | A: Ntn/PP2C | X: Ntn | H: Penicillin acylase, catalytic domain | T: PAS_9 | F: | ECOD (20:10:01) | |
| L [auth l] | e5mp9l1 | A: Ntn/PP2C | X: Ntn | H: Penicillin acylase, catalytic domain | T: PAS_9 | F: | ECOD (20:10:01) | |
| Y [auth 4] | e5mp941 | A: Ntn/PP2C | X: Ntn | H: Penicillin acylase, catalytic domain | T: PAS_9 | F: | ECOD (20:10:01) | |
| K [auth k] | e5mp9k1 | A: Ntn/PP2C | X: Ntn | H: Penicillin acylase, catalytic domain | T: PAS_9 | F: | ECOD (20:10:01) | |
| X [auth 3] | e5mp931 | A: Ntn/PP2C | X: Ntn | H: Penicillin acylase, catalytic domain | T: PAS_9 | F: | ECOD (20:10:01) | |
| J [auth j] | e5mp9j1 | A: Ntn/PP2C | X: Ntn | H: Penicillin acylase, catalytic domain | T: PAS_9 | F: | ECOD (20:10:01) | |
| A [auth a] | e5mp9a1 | A: Ntn/PP2C | X: Ntn | H: Penicillin acylase, catalytic domain | T: PAS_9 | F: | ECOD (20:10:01) | |
| O [auth A] | e5mp9A1 | A: Ntn/PP2C | X: Ntn | H: Penicillin acylase, catalytic domain | T: PAS_9 | F: | ECOD (20:10:01) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| I [auth i], W [auth 2] | PF12465 | Proteasome beta subunits C terminal (Pr_beta_C) | Proteasome beta subunits C terminal | - | Family |
| G [auth g], U [auth G] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| G [auth g], U [auth G] | PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family |
| F [auth f], T [auth F] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| F [auth f], T [auth F] | PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family |
| E [auth e], S [auth E] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| D [auth d], R [auth D] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| D [auth d], R [auth D] | PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family |
| C [auth c], Q [auth C] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| C [auth c], Q [auth C] | PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family |
| HA [auth J] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| HA [auth J] | PF16450 | Proteasomal ATPase OB C-terminal domain (Prot_ATP_ID_OB_C) | Proteasomal ATPase OB C-terminal domain | This is the C-terminal interdomain (ID) or oligonucleotide binding (OB) domain of proteasomal ATPase [1-2] | Domain |
| HA [auth J] | PF17862 | AAA+ lid domain (AAA_lid_3) | AAA+ lid domain | This entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. | Domain |
| HA [auth J] | PF00004 | ATPase family associated with various cellular activities (AAA) (AAA) | ATPase family associated with various cellular activities (AAA) | AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. | Domain |
| B [auth b], P [auth B] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| B [auth b], P [auth B] | PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family |
| GA [auth M] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| GA [auth M] | PF16450 | Proteasomal ATPase OB C-terminal domain (Prot_ATP_ID_OB_C) | Proteasomal ATPase OB C-terminal domain | This is the C-terminal interdomain (ID) or oligonucleotide binding (OB) domain of proteasomal ATPase [1-2] | Domain |
| GA [auth M] | PF17862 | AAA+ lid domain (AAA_lid_3) | AAA+ lid domain | This entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. | Domain |
| GA [auth M] | PF00004 | ATPase family associated with various cellular activities (AAA) (AAA) | ATPase family associated with various cellular activities (AAA) | AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. | Domain |
| FA [auth L] | PF16450 | Proteasomal ATPase OB C-terminal domain (Prot_ATP_ID_OB_C) | Proteasomal ATPase OB C-terminal domain | This is the C-terminal interdomain (ID) or oligonucleotide binding (OB) domain of proteasomal ATPase [1-2] | Domain |
| FA [auth L] | PF17862 | AAA+ lid domain (AAA_lid_3) | AAA+ lid domain | This entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. | Domain |
| FA [auth L] | PF00004 | ATPase family associated with various cellular activities (AAA) (AAA) | ATPase family associated with various cellular activities (AAA) | AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. | Domain |
| EA [auth K] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| EA [auth K] | PF16450 | Proteasomal ATPase OB C-terminal domain (Prot_ATP_ID_OB_C) | Proteasomal ATPase OB C-terminal domain | This is the C-terminal interdomain (ID) or oligonucleotide binding (OB) domain of proteasomal ATPase [1-2] | Domain |
| EA [auth K] | PF00004 | ATPase family associated with various cellular activities (AAA) (AAA) | ATPase family associated with various cellular activities (AAA) | AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. | Domain |
| DA [auth I] | PF12465 | Proteasome beta subunits C terminal (Pr_beta_C) | Proteasome beta subunits C terminal | - | Family |
| DA [auth I] | PF16450 | Proteasomal ATPase OB C-terminal domain (Prot_ATP_ID_OB_C) | Proteasomal ATPase OB C-terminal domain | This is the C-terminal interdomain (ID) or oligonucleotide binding (OB) domain of proteasomal ATPase [1-2] | Domain |
| DA [auth I] | PF17862 | AAA+ lid domain (AAA_lid_3) | AAA+ lid domain | This entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. | Domain |
| DA [auth I] | PF00004 | ATPase family associated with various cellular activities (AAA) (AAA) | ATPase family associated with various cellular activities (AAA) | AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. | Domain |
| CA [auth H] | PF17862 | AAA+ lid domain (AAA_lid_3) | AAA+ lid domain | This entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. | Domain |
| CA [auth H] | PF00004 | ATPase family associated with various cellular activities (AAA) (AAA) | ATPase family associated with various cellular activities (AAA) | AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. | Domain |
| BA [auth 7], N [auth n] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| AA [auth 6], M [auth m] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| K [auth k], Y [auth 4] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| J [auth j], X [auth 3] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| A [auth a], O [auth A] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| A [auth a], O [auth A] | PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family |














