5NEY | pdb_00005ney

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	Calcium-mediated lectin	8042940	3001391	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Calcium-mediated lectin	8042940	3001391	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Calcium-mediated lectin	8042940	3001391	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Calcium-mediated lectin	8042940	3001391	SCOP2B (2022-06-29)

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	Tfb5	e5neyD1	A: alpha bundles	X: TIM beta/alpha-barrel	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: Tfb5	ECOD (develop294)
C	Tfb5	e5neyC1	A: alpha bundles	X: TIM beta/alpha-barrel	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: Tfb5	ECOD (develop294)
B	Tfb5	e5neyB1	A: alpha bundles	X: TIM beta/alpha-barrel	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: Tfb5	ECOD (develop294)
A	Tfb5	e5neyA1	A: alpha bundles	X: TIM beta/alpha-barrel	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: Tfb5	ECOD (develop294)

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	2.60.120.400	Mainly Beta	Sandwich	Jelly Rolls	Calcium-mediated lectin	CATH (4.3.0)
C	2.60.120.400	Mainly Beta	Sandwich	Jelly Rolls	Calcium-mediated lectin	CATH (4.3.0)
B	2.60.120.400	Mainly Beta	Sandwich	Jelly Rolls	Calcium-mediated lectin	CATH (4.3.0)
A	2.60.120.400	Mainly Beta	Sandwich	Jelly Rolls	Calcium-mediated lectin	CATH (4.3.0)

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF07472	Fucose-binding lectin II (PA-IIL) (PA-IIL)	Fucose-binding lectin II (PA-IIL)	-	Family

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Fucose-binding lectin II (PA-IIL)	binding carbohydrate binding cation binding ion binding metal ion binding small molecule binding	cell aggregation biofilm formation biological process involved in intraspecies interaction between organisms single-species biofilm formation cellular process aggregation of unicellular organisms	-
E	CYS-TRD-TRP-LYD-LYS-LYD-LYS-LYD-TRP-TRD-CYS-ALA	-	-	-

Chains	Accession	Name	Type
A, B, C, D	IPR036684	Calcium-mediated lectin superfamily	Homologous Superfamily
A, B, C, D	IPR010907	Calcium-mediated lectin	Domain
A, B, C, D	IPR016927	Lectin, sugar-binding	Family

Modified Residue(s)
Chain	Residue(s)	Description
E	DLY
E	DTR	RESID: AA0198 PSI-MOD : D-tryptophan MOD:00205

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

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