5NV4 | pdb_00005nv4

UDP-Glucose Glycoprotein Glucosyltransferase from Chaetomium thermophilum double mutant D611C:G1050C

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Thioredoxin-like	8106395	3000031	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A		e5nv4A1	A: CRISPR-associated protein Cse2	X: CRISPR-associated protein Cse2	H: CRISPR-associated protein Cse2	T: CRISPR_Cse2	F:	ECOD (20:10:01)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF18400	Thioredoxin-like domain (Thioredoxin_12)	Thioredoxin-like domain	This is one of four TRXL(thioredoxin-like) domains found in UDP-glucose:glycoprotein glucosyltransferase (UGGT)[1].	Domain
A	PF18403	Thioredoxin-like domain (Thioredoxin_15)	Thioredoxin-like domain	This is the fourth TRXL(thioredoxin-like) domain found in UDP-glucose:glycoprotein glucosyltransferase (UGGT)[1].	Domain
A	PF18404	Glucosyltransferase 24 (Glyco_transf_24)	Glucosyltransferase 24	This is the catalytic domain found in UDP-glucose:glycoprotein glucosyltransferase (UGGT). This domain belongs to glucosyltransferase 24 family (GT24) A-type domain. The GT domain displays the expected glycosyltransferase type A (GT-A) fold [1].	Domain
A	PF18402	Thioredoxin-like domain (Thioredoxin_14)	Thioredoxin-like domain	This is the third out of four TRXL(thioredoxin-like) domains found in UDP-glucose:glycoprotein glucosyltransferase (UGGT)[1].	Domain
A	PF06427	UDP-glucose:Glycoprotein Glucosyltransferase (UDP-g_GGTase)	UDP-glucose:Glycoprotein Glucosyltransferase	This domain consists of 7 stranded beta-sandwiches found in UDP-glucose-glycoprotein glucosyltransferase-like proteins [1]. UDP-g_GGTase is an important, central component of the QC system in the ER for checking that glycoproteins are folded correctl ...	This domain consists of 7 stranded beta-sandwiches found in UDP-glucose-glycoprotein glucosyltransferase-like proteins [1]. UDP-g_GGTase is an important, central component of the QC system in the ER for checking that glycoproteins are folded correctly. This QC prevents incorrectly folded glycoproteins from leaving the ER [2,3].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	UDP-glucose-glycoprotein glucosyltransferase-like protein	unfolded protein binding protein binding binding nucleoside phosphate binding nucleotide binding heterocyclic compound binding small molecule binding UDP-glycosyltransferase activity glycosyltransferase activity transferase activity glucosyltransferase activity hexosyltransferase activity catalytic activity UDP-glucose:glycoprotein glucosyltransferase activity unfolded protein binding protein binding binding nucleoside phosphate binding nucleotide binding heterocyclic compound binding small molecule binding UDP-glycosyltransferase activity glycosyltransferase activity transferase activity glucosyltransferase activity hexosyltransferase activity catalytic activity UDP-glucose:glycoprotein glucosyltransferase activity UDP-glucosyltransferase activity cation binding ion binding metal ion binding	cellular response to stimulus catabolic process response to stimulus proteasomal protein catabolic process primary metabolic process protein catabolic process macromolecule catabolic process ERAD pathway cellular response to stress response to chemical response to stress cellular process metabolic process protein metabolic process cellular response to stimulus catabolic process response to stimulus proteasomal protein catabolic process primary metabolic process protein catabolic process macromolecule catabolic process ERAD pathway cellular response to stress response to chemical response to stress cellular process metabolic process protein metabolic process macromolecule metabolic process response to endoplasmic reticulum stress	membrane-bounded organelle intracellular anatomical structure membrane-enclosed lumen intracellular membrane-bounded organelle endomembrane system intracellular organelle lumen endoplasmic reticulum lumen intracellular organelle cellular anatomical structure organelle lumen organelle endoplasmic reticulum cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR040693	UGGT, thioredoxin-like domain 1	Domain
A	IPR040525	UDP-glucose:glycoprotein glucosyltransferase, thioredoxin-like domain 4	Domain
A	IPR040497	Glucosyltransferase 24, catalytic domain	Domain
A	IPR040694	UGGT, thioredoxin-like domain 2	Domain
A	IPR029044	Nucleotide-diphospho-sugar transferases	Homologous Superfamily
A	IPR040692	UGGT, thioredoxin-like domain 3	Domain
A	IPR009448	UDP-glucose:Glycoprotein Glucosyltransferase	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.