5OD2
Crystal structure of ADP-dependent glucokinase from Methanocaldococcus jannaschii
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d5od2a_ | Alpha and beta proteins (a/b) | Ribokinase-like | Ribokinase-like | automated matches | automated matches | (Methanocaldococcus jannaschii DSM 2661 ) [TaxId: 243232 ], | SCOPe (2.08) |
B | d5od2b_ | Alpha and beta proteins (a/b) | Ribokinase-like | Ribokinase-like | automated matches | automated matches | (Methanocaldococcus jannaschii DSM 2661 ) [TaxId: 243232 ], | SCOPe (2.08) |
C | d5od2c_ | Alpha and beta proteins (a/b) | Ribokinase-like | Ribokinase-like | automated matches | automated matches | (Methanocaldococcus jannaschii DSM 2661 ) [TaxId: 243232 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Ribokinase-like | 8066073 | 3001268 | SCOP2B (2022-06-29) |
B | SCOP2 Family | ADP-specific Phosphofructokinase/Glucokinase | 8066072 | 4003424 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | Ribokinase-like | 8066073 | 3001268 | SCOP2 (2022-06-29) |
C | SCOP2B Superfamily | Ribokinase-like | 8066073 | 3001268 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | ADP_PFK_GK | e5od2A1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Ribokinase-like (From Topology) | T: Ribokinase-like | F: ADP_PFK_GK | ECOD (1.6) |
B | ADP_PFK_GK | e5od2B1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Ribokinase-like (From Topology) | T: Ribokinase-like | F: ADP_PFK_GK | ECOD (1.6) |
C | ADP_PFK_GK | e5od2C1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Ribokinase-like (From Topology) | T: Ribokinase-like | F: ADP_PFK_GK | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.1190.20 | Alpha Beta | 3-Layer(aba) Sandwich | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | Ribokinase | CATH (4.3.0) |
A | 3.30.1110.20 | Alpha Beta | 2-Layer Sandwich | Adenosine kinase, small domain | CATH (4.3.0) | |
B | 3.40.1190.20 | Alpha Beta | 3-Layer(aba) Sandwich | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | Ribokinase | CATH (4.3.0) |
B | 3.30.1110.20 | Alpha Beta | 2-Layer Sandwich | Adenosine kinase, small domain | CATH (4.3.0) | |
C | 3.40.1190.20 | Alpha Beta | 3-Layer(aba) Sandwich | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | Ribokinase | CATH (4.3.0) |
C | 3.30.1110.20 | Alpha Beta | 2-Layer Sandwich | Adenosine kinase, small domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF04587 | ADP-specific Phosphofructokinase/Glucokinase conserved region (ADP_PFK_GK) | ADP-specific Phosphofructokinase/Glucokinase conserved region | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR011790 | ADP-specific phosphofructokinase, archaeal | Family | |
IPR029056 | Ribokinase-like | Homologous Superfamily | |
IPR007666 | ADP-specific phosphofructokinase/glucokinase | Family | |
IPR015990 | ADP-specific phosphofructokinase/glucokinase, archaeal | Family |