5SY1
Structure of the STRA6 receptor for retinol uptake in complex with calmodulin
External Resource: Annotation
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
- Membrane Protein Annotation: mpstruc
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth C] | SCOP2 Family | Calmodulin-like | 8096507 | 4000924 | SCOP2 (2022-06-29) |
A [auth C] | SCOP2 Superfamily | EF-hand | 8096508 | 3001983 | SCOP2 (2022-06-29) |
D | SCOP2B Superfamily | EF-hand | 8096508 | 3001983 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth C] | EF-hand_7_8 | e5sy1C2 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_8 | ECOD (1.6) |
A [auth C] | EF-hand_7_5 | e5sy1C1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_5 | ECOD (1.6) |
D | EF-hand_7_8 | e5sy1D2 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_8 | ECOD (1.6) |
D | EF-hand_7_5 | e5sy1D1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_5 | ECOD (1.6) |
B [auth A] | RBP_receptor | e5sy1A1 | A: alpha complex topology | X: Retinol uptake receptor STRA6 (From Topology) | H: Retinol uptake receptor STRA6 (From Topology) | T: Retinol uptake receptor STRA6 | F: RBP_receptor | ECOD (1.6) |
C [auth B] | RBP_receptor | e5sy1B1 | A: alpha complex topology | X: Retinol uptake receptor STRA6 (From Topology) | H: Retinol uptake receptor STRA6 (From Topology) | T: Retinol uptake receptor STRA6 | F: RBP_receptor | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth C], D | PF13499 | EF-hand domain pair (EF-hand_7) | EF-hand domain pair | Domain | |
B [auth A], C [auth B] | PF14752 | Retinol binding protein receptor (RBP_receptor) | Retinol binding protein receptor | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth C], D | IPR050230 | Calmodulin/Myosin light chain/Troponin C-like | Family |
A [auth C], D | IPR018247 | EF-Hand 1, calcium-binding site | Binding Site |
A [auth C], D | IPR002048 | EF-hand domain | Domain |
A [auth C], D | IPR011992 | EF-hand domain pair | Homologous Superfamily |
B [auth A], C [auth B] | IPR026612 | Receptor for retinol uptake STRA6-like | Family |
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Vitamin A receptor/transporter |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Novel Receptors | STRA6 retinol-uptake receptor in complex with calmodulin (CaM) |