5TMW

Crystal Structure of the ER-alpha Ligand-binding Domain (Y537S) in Complex with the OBHS derivative, 4-acetamidophenyl (1S,2R,4S)-5,6-bis(4-hydroxyphenyl)-7-oxabicyclo[2.2.1]hept-5-ene-2-sulfonate


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
C [auth B]SCOP2B SuperfamilyNuclear receptor ligand-binding domain 8044103 3001442 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyNuclear receptor ligand-binding domain 8044103 3001442 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
C [auth B]Hormone_recep_1e5tmwB1 A: alpha arraysX: Nuclear receptor ligand-binding domain (From Topology)H: Nuclear receptor ligand-binding domain (From Topology)T: Nuclear receptor ligand-binding domainF: Hormone_recep_1ECOD (1.6)
AHormone_recep_1e5tmwA1 A: alpha arraysX: Nuclear receptor ligand-binding domain (From Topology)H: Nuclear receptor ligand-binding domain (From Topology)T: Nuclear receptor ligand-binding domainF: Hormone_recep_1ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
C [auth B]1.10.565.10 Mainly Alpha Orthogonal Bundle Retinoid X Receptor Retinoid X ReceptorCATH (4.3.0)
A1.10.565.10 Mainly Alpha Orthogonal Bundle Retinoid X Receptor Retinoid X ReceptorCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
C [auth B]
PF00104Ligand-binding domain of nuclear hormone receptor (Hormone_recep)Ligand-binding domain of nuclear hormone receptorThis all helical domain is involved in binding the hormone in these receptors.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
C [auth B]
Estrogen receptor
B [auth C],
D
Nuclear receptor coactivator 2

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
C [auth B]
IPR001628Zinc finger, nuclear hormone receptor-typeDomain
A,
C [auth B]
IPR050200Nuclear hormone receptor family NR3 subfamilyFamily
A,
C [auth B]
IPR013088Zinc finger, NHR/GATA-typeHomologous Superfamily
A,
C [auth B]
IPR024736Oestrogen-type nuclear receptor final C-terminal domainDomain
A,
C [auth B]
IPR001292Estrogen receptorFamily
A,
C [auth B]
IPR024178Estrogen receptor/oestrogen-related receptorFamily
A,
C [auth B]
IPR001723Nuclear hormone receptorFamily
A,
C [auth B]
IPR046944Estrogen receptor, N-terminalDomain
A,
C [auth B]
IPR000536Nuclear hormone receptor, ligand-binding domainDomain
A,
C [auth B]
IPR035500Nuclear hormone receptor-like domain superfamilyHomologous Superfamily
B [auth C],
D
IPR010011Nuclear receptor coactivator, DUF1518Domain
B [auth C],
D
IPR009110Nuclear receptor coactivator, interlockingHomologous Superfamily
B [auth C],
D
IPR037077Nuclear receptor coactivator, Ncoa-type, interlocking domain superfamilyHomologous Superfamily
B [auth C],
D
IPR017426Nuclear receptor coactivatorFamily
B [auth C],
D
IPR014935Nuclear receptor coactivator, receptor-binding domainDomain
B [auth C],
D
IPR013767PAS foldDomain
B [auth C],
D
IPR000014PAS domainDomain
B [auth C],
D
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainDomain
B [auth C],
D
IPR014920Nuclear receptor coactivator, Ncoa-type, interlockingDomain
B [auth C],
D
IPR035965PAS domain superfamilyHomologous Superfamily
B [auth C],
D
IPR028822Nuclear receptor coactivator 2, basic helix-loop-helixDomain
B [auth C],
D
IPR032565Nuclear receptor coactivator 2/3, DUF4927Domain
B [auth C],
D
IPR036638Helix-loop-helix DNA-binding domain superfamilyHomologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A,
C [auth B]
PharosP03372
B [auth C],
D
PharosQ15596