5UK4 | pdb_00005uk4

VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
SAbDab Antibody Annotation
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
Y [auth M]	SCOP2B Superfamily	Rhabdovirus nucleoprotein-like	8041903	3001763	SCOP2B (2022-06-29)
W [auth N]	SCOP2B Superfamily	Rhabdovirus nucleoprotein-like	8041903	3001763	SCOP2B (2022-06-29)
U [auth L]	SCOP2B Superfamily	Rhabdovirus nucleoprotein-like	8041903	3001763	SCOP2B (2022-06-29)
S [auth K]	SCOP2B Superfamily	Rhabdovirus nucleoprotein-like	8041903	3001763	SCOP2B (2022-06-29)
Q [auth T]	SCOP2B Superfamily	Rhabdovirus nucleoprotein-like	8041903	3001763	SCOP2B (2022-06-29)
O [auth E]	SCOP2B Superfamily	Rhabdovirus nucleoprotein-like	8041903	3001763	SCOP2B (2022-06-29)
MA [auth A]	SCOP2B Superfamily	Rhabdovirus nucleoprotein-like	8041903	3001763	SCOP2B (2022-06-29)
M [auth S]	SCOP2B Superfamily	Rhabdovirus nucleoprotein-like	8041903	3001763	SCOP2B (2022-06-29)
KA [auth J]	SCOP2B Superfamily	Rhabdovirus nucleoprotein-like	8041903	3001763	SCOP2B (2022-06-29)
K [auth D]	SCOP2B Superfamily	Rhabdovirus nucleoprotein-like	8041903	3001763	SCOP2B (2022-06-29)
IA [auth O]	SCOP2B Superfamily	Rhabdovirus nucleoprotein-like	8041903	3001763	SCOP2B (2022-06-29)
I [auth R]	SCOP2B Superfamily	Rhabdovirus nucleoprotein-like	8041903	3001763	SCOP2B (2022-06-29)
GA [auth I]	SCOP2B Superfamily	Rhabdovirus nucleoprotein-like	8041903	3001763	SCOP2B (2022-06-29)
G [auth C]	SCOP2B Superfamily	Rhabdovirus nucleoprotein-like	8041903	3001763	SCOP2B (2022-06-29)
EA [auth H]	SCOP2B Superfamily	Rhabdovirus nucleoprotein-like	8041903	3001763	SCOP2B (2022-06-29)
E [auth Q]	SCOP2B Superfamily	Rhabdovirus nucleoprotein-like	8041903	3001763	SCOP2B (2022-06-29)
CA [auth G]	SCOP2B Superfamily	Rhabdovirus nucleoprotein-like	8041903	3001763	SCOP2B (2022-06-29)
C [auth B]	SCOP2B Superfamily	Rhabdovirus nucleoprotein-like	8041903	3001763	SCOP2B (2022-06-29)
AA [auth F]	SCOP2B Superfamily	Rhabdovirus nucleoprotein-like	8041903	3001763	SCOP2B (2022-06-29)
A [auth P]	SCOP2B Superfamily	Rhabdovirus nucleoprotein-like	8041903	3001763	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
Z [auth m]	V-set_12	e5uk4m1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set_12	ECOD (1.6)
X [auth n]	V-set_12	e5uk4n1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set_12	ECOD (1.6)
V [auth l]	V-set_12	e5uk4l1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set_12	ECOD (1.6)
T [auth k]	V-set_12	e5uk4k1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set_12	ECOD (1.6)
R [auth t]	V-set_12	e5uk4t1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set_12	ECOD (1.6)
P [auth e]	V-set_12	e5uk4e1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set_12	ECOD (1.6)
NA [auth a]	V-set_12	e5uk4a1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set_12	ECOD (1.6)
N [auth s]	V-set_12	e5uk4s1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set_12	ECOD (1.6)
LA [auth j]	V-set_12	e5uk4j1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set_12	ECOD (1.6)
L [auth d]	V-set_12	e5uk4d1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set_12	ECOD (1.6)
JA [auth o]	V-set_12	e5uk4o1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set_12	ECOD (1.6)
J [auth r]	V-set_12	e5uk4r1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set_12	ECOD (1.6)
HA [auth i]	V-set_12	e5uk4i1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set_12	ECOD (1.6)
H [auth c]	V-set_12	e5uk4c1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set_12	ECOD (1.6)
FA [auth h]	V-set_12	e5uk4h1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set_12	ECOD (1.6)
F [auth q]	V-set_12	e5uk4q1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set_12	ECOD (1.6)
DA [auth g]	V-set_12	e5uk4g1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set_12	ECOD (1.6)
D [auth b]	V-set_12	e5uk4b1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set_12	ECOD (1.6)
BA [auth f]	V-set_12	e5uk4f1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set_12	ECOD (1.6)
B [auth p]	V-set_12	e5uk4p1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: V-set_12	ECOD (1.6)
Y [auth M]	Rhabdo_ncap	e5uk4M1	A: alpha complex topology	X: P40 nucleoprotein-like	H: Rhabdovirus nucleocapsid protein (From Topology)	T: Rhabdovirus nucleocapsid protein	F: Rhabdo_ncap	ECOD (1.6)
W [auth N]	Rhabdo_ncap	e5uk4N1	A: alpha complex topology	X: P40 nucleoprotein-like	H: Rhabdovirus nucleocapsid protein (From Topology)	T: Rhabdovirus nucleocapsid protein	F: Rhabdo_ncap	ECOD (1.6)
U [auth L]	Rhabdo_ncap	e5uk4L1	A: alpha complex topology	X: P40 nucleoprotein-like	H: Rhabdovirus nucleocapsid protein (From Topology)	T: Rhabdovirus nucleocapsid protein	F: Rhabdo_ncap	ECOD (1.6)
S [auth K]	Rhabdo_ncap	e5uk4K1	A: alpha complex topology	X: P40 nucleoprotein-like	H: Rhabdovirus nucleocapsid protein (From Topology)	T: Rhabdovirus nucleocapsid protein	F: Rhabdo_ncap	ECOD (1.6)
Q [auth T]	Rhabdo_ncap	e5uk4T1	A: alpha complex topology	X: P40 nucleoprotein-like	H: Rhabdovirus nucleocapsid protein (From Topology)	T: Rhabdovirus nucleocapsid protein	F: Rhabdo_ncap	ECOD (1.6)
O [auth E]	Rhabdo_ncap	e5uk4E1	A: alpha complex topology	X: P40 nucleoprotein-like	H: Rhabdovirus nucleocapsid protein (From Topology)	T: Rhabdovirus nucleocapsid protein	F: Rhabdo_ncap	ECOD (1.6)
MA [auth A]	Rhabdo_ncap	e5uk4A1	A: alpha complex topology	X: P40 nucleoprotein-like	H: Rhabdovirus nucleocapsid protein (From Topology)	T: Rhabdovirus nucleocapsid protein	F: Rhabdo_ncap	ECOD (1.6)
M [auth S]	Rhabdo_ncap	e5uk4S1	A: alpha complex topology	X: P40 nucleoprotein-like	H: Rhabdovirus nucleocapsid protein (From Topology)	T: Rhabdovirus nucleocapsid protein	F: Rhabdo_ncap	ECOD (1.6)
KA [auth J]	Rhabdo_ncap	e5uk4J1	A: alpha complex topology	X: P40 nucleoprotein-like	H: Rhabdovirus nucleocapsid protein (From Topology)	T: Rhabdovirus nucleocapsid protein	F: Rhabdo_ncap	ECOD (1.6)
K [auth D]	Rhabdo_ncap	e5uk4D1	A: alpha complex topology	X: P40 nucleoprotein-like	H: Rhabdovirus nucleocapsid protein (From Topology)	T: Rhabdovirus nucleocapsid protein	F: Rhabdo_ncap	ECOD (1.6)
IA [auth O]	Rhabdo_ncap	e5uk4O1	A: alpha complex topology	X: P40 nucleoprotein-like	H: Rhabdovirus nucleocapsid protein (From Topology)	T: Rhabdovirus nucleocapsid protein	F: Rhabdo_ncap	ECOD (1.6)
I [auth R]	Rhabdo_ncap	e5uk4R1	A: alpha complex topology	X: P40 nucleoprotein-like	H: Rhabdovirus nucleocapsid protein (From Topology)	T: Rhabdovirus nucleocapsid protein	F: Rhabdo_ncap	ECOD (1.6)
GA [auth I]	Rhabdo_ncap	e5uk4I1	A: alpha complex topology	X: P40 nucleoprotein-like	H: Rhabdovirus nucleocapsid protein (From Topology)	T: Rhabdovirus nucleocapsid protein	F: Rhabdo_ncap	ECOD (1.6)
G [auth C]	Rhabdo_ncap	e5uk4C1	A: alpha complex topology	X: P40 nucleoprotein-like	H: Rhabdovirus nucleocapsid protein (From Topology)	T: Rhabdovirus nucleocapsid protein	F: Rhabdo_ncap	ECOD (1.6)
EA [auth H]	Rhabdo_ncap	e5uk4H1	A: alpha complex topology	X: P40 nucleoprotein-like	H: Rhabdovirus nucleocapsid protein (From Topology)	T: Rhabdovirus nucleocapsid protein	F: Rhabdo_ncap	ECOD (1.6)
E [auth Q]	Rhabdo_ncap	e5uk4Q1	A: alpha complex topology	X: P40 nucleoprotein-like	H: Rhabdovirus nucleocapsid protein (From Topology)	T: Rhabdovirus nucleocapsid protein	F: Rhabdo_ncap	ECOD (1.6)
CA [auth G]	Rhabdo_ncap	e5uk4G1	A: alpha complex topology	X: P40 nucleoprotein-like	H: Rhabdovirus nucleocapsid protein (From Topology)	T: Rhabdovirus nucleocapsid protein	F: Rhabdo_ncap	ECOD (1.6)
C [auth B]	Rhabdo_ncap	e5uk4B1	A: alpha complex topology	X: P40 nucleoprotein-like	H: Rhabdovirus nucleocapsid protein (From Topology)	T: Rhabdovirus nucleocapsid protein	F: Rhabdo_ncap	ECOD (1.6)
AA [auth F]	Rhabdo_ncap	e5uk4F1	A: alpha complex topology	X: P40 nucleoprotein-like	H: Rhabdovirus nucleocapsid protein (From Topology)	T: Rhabdovirus nucleocapsid protein	F: Rhabdo_ncap	ECOD (1.6)
A [auth P]	Rhabdo_ncap	e5uk4P1	A: alpha complex topology	X: P40 nucleoprotein-like	H: Rhabdovirus nucleocapsid protein (From Topology)	T: Rhabdovirus nucleocapsid protein	F: Rhabdo_ncap	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
Z [auth m]	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)
X [auth n]	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)
V [auth l]	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)
T [auth k]	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)
R [auth t]	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)
P [auth e]	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)
NA [auth a]	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)
N [auth s]	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)
LA [auth j]	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)
L [auth d]	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)
JA [auth o]	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)
J [auth r]	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)
HA [auth i]	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)
H [auth c]	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)
FA [auth h]	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)
F [auth q]	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)
DA [auth g]	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)
D [auth b]	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)
BA [auth f]	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)
B [auth p]	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (4.3.0)
Y [auth M]	1.10.3570.10	Mainly Alpha	Orthogonal Bundle	Rhabdovirus nucleoprotein-like fold	Rhabdovirus nucleocapsid protein like domain	CATH (4.3.0)
Y [auth M]	1.10.3610.10	Mainly Alpha	Orthogonal Bundle	Rhabdovirus nucleoprotein-like	Nucleoprotein	CATH (4.3.0)
W [auth N]	1.10.3570.10	Mainly Alpha	Orthogonal Bundle	Rhabdovirus nucleoprotein-like fold	Rhabdovirus nucleocapsid protein like domain	CATH (4.3.0)
W [auth N]	1.10.3610.10	Mainly Alpha	Orthogonal Bundle	Rhabdovirus nucleoprotein-like	Nucleoprotein	CATH (4.3.0)
U [auth L]	1.10.3570.10	Mainly Alpha	Orthogonal Bundle	Rhabdovirus nucleoprotein-like fold	Rhabdovirus nucleocapsid protein like domain	CATH (4.3.0)
U [auth L]	1.10.3610.10	Mainly Alpha	Orthogonal Bundle	Rhabdovirus nucleoprotein-like	Nucleoprotein	CATH (4.3.0)
S [auth K]	1.10.3570.10	Mainly Alpha	Orthogonal Bundle	Rhabdovirus nucleoprotein-like fold	Rhabdovirus nucleocapsid protein like domain	CATH (4.3.0)
S [auth K]	1.10.3610.10	Mainly Alpha	Orthogonal Bundle	Rhabdovirus nucleoprotein-like	Nucleoprotein	CATH (4.3.0)
Q [auth T]	1.10.3570.10	Mainly Alpha	Orthogonal Bundle	Rhabdovirus nucleoprotein-like fold	Rhabdovirus nucleocapsid protein like domain	CATH (4.3.0)
Q [auth T]	1.10.3610.10	Mainly Alpha	Orthogonal Bundle	Rhabdovirus nucleoprotein-like	Nucleoprotein	CATH (4.3.0)
O [auth E]	1.10.3570.10	Mainly Alpha	Orthogonal Bundle	Rhabdovirus nucleoprotein-like fold	Rhabdovirus nucleocapsid protein like domain	CATH (4.3.0)
O [auth E]	1.10.3610.10	Mainly Alpha	Orthogonal Bundle	Rhabdovirus nucleoprotein-like	Nucleoprotein	CATH (4.3.0)
MA [auth A]	1.10.3570.10	Mainly Alpha	Orthogonal Bundle	Rhabdovirus nucleoprotein-like fold	Rhabdovirus nucleocapsid protein like domain	CATH (4.3.0)
MA [auth A]	1.10.3610.10	Mainly Alpha	Orthogonal Bundle	Rhabdovirus nucleoprotein-like	Nucleoprotein	CATH (4.3.0)
M [auth S]	1.10.3570.10	Mainly Alpha	Orthogonal Bundle	Rhabdovirus nucleoprotein-like fold	Rhabdovirus nucleocapsid protein like domain	CATH (4.3.0)
M [auth S]	1.10.3610.10	Mainly Alpha	Orthogonal Bundle	Rhabdovirus nucleoprotein-like	Nucleoprotein	CATH (4.3.0)
KA [auth J]	1.10.3570.10	Mainly Alpha	Orthogonal Bundle	Rhabdovirus nucleoprotein-like fold	Rhabdovirus nucleocapsid protein like domain	CATH (4.3.0)
KA [auth J]	1.10.3610.10	Mainly Alpha	Orthogonal Bundle	Rhabdovirus nucleoprotein-like	Nucleoprotein	CATH (4.3.0)
K [auth D]	1.10.3570.10	Mainly Alpha	Orthogonal Bundle	Rhabdovirus nucleoprotein-like fold	Rhabdovirus nucleocapsid protein like domain	CATH (4.3.0)
K [auth D]	1.10.3610.10	Mainly Alpha	Orthogonal Bundle	Rhabdovirus nucleoprotein-like	Nucleoprotein	CATH (4.3.0)
IA [auth O]	1.10.3570.10	Mainly Alpha	Orthogonal Bundle	Rhabdovirus nucleoprotein-like fold	Rhabdovirus nucleocapsid protein like domain	CATH (4.3.0)
IA [auth O]	1.10.3610.10	Mainly Alpha	Orthogonal Bundle	Rhabdovirus nucleoprotein-like	Nucleoprotein	CATH (4.3.0)
I [auth R]	1.10.3570.10	Mainly Alpha	Orthogonal Bundle	Rhabdovirus nucleoprotein-like fold	Rhabdovirus nucleocapsid protein like domain	CATH (4.3.0)
I [auth R]	1.10.3610.10	Mainly Alpha	Orthogonal Bundle	Rhabdovirus nucleoprotein-like	Nucleoprotein	CATH (4.3.0)
GA [auth I]	1.10.3570.10	Mainly Alpha	Orthogonal Bundle	Rhabdovirus nucleoprotein-like fold	Rhabdovirus nucleocapsid protein like domain	CATH (4.3.0)
GA [auth I]	1.10.3610.10	Mainly Alpha	Orthogonal Bundle	Rhabdovirus nucleoprotein-like	Nucleoprotein	CATH (4.3.0)
G [auth C]	1.10.3570.10	Mainly Alpha	Orthogonal Bundle	Rhabdovirus nucleoprotein-like fold	Rhabdovirus nucleocapsid protein like domain	CATH (4.3.0)
G [auth C]	1.10.3610.10	Mainly Alpha	Orthogonal Bundle	Rhabdovirus nucleoprotein-like	Nucleoprotein	CATH (4.3.0)
EA [auth H]	1.10.3570.10	Mainly Alpha	Orthogonal Bundle	Rhabdovirus nucleoprotein-like fold	Rhabdovirus nucleocapsid protein like domain	CATH (4.3.0)
EA [auth H]	1.10.3610.10	Mainly Alpha	Orthogonal Bundle	Rhabdovirus nucleoprotein-like	Nucleoprotein	CATH (4.3.0)
E [auth Q]	1.10.3570.10	Mainly Alpha	Orthogonal Bundle	Rhabdovirus nucleoprotein-like fold	Rhabdovirus nucleocapsid protein like domain	CATH (4.3.0)
E [auth Q]	1.10.3610.10	Mainly Alpha	Orthogonal Bundle	Rhabdovirus nucleoprotein-like	Nucleoprotein	CATH (4.3.0)
CA [auth G]	1.10.3570.10	Mainly Alpha	Orthogonal Bundle	Rhabdovirus nucleoprotein-like fold	Rhabdovirus nucleocapsid protein like domain	CATH (4.3.0)
CA [auth G]	1.10.3610.10	Mainly Alpha	Orthogonal Bundle	Rhabdovirus nucleoprotein-like	Nucleoprotein	CATH (4.3.0)
C [auth B]	1.10.3570.10	Mainly Alpha	Orthogonal Bundle	Rhabdovirus nucleoprotein-like fold	Rhabdovirus nucleocapsid protein like domain	CATH (4.3.0)
C [auth B]	1.10.3610.10	Mainly Alpha	Orthogonal Bundle	Rhabdovirus nucleoprotein-like	Nucleoprotein	CATH (4.3.0)
AA [auth F]	1.10.3570.10	Mainly Alpha	Orthogonal Bundle	Rhabdovirus nucleoprotein-like fold	Rhabdovirus nucleocapsid protein like domain	CATH (4.3.0)
AA [auth F]	1.10.3610.10	Mainly Alpha	Orthogonal Bundle	Rhabdovirus nucleoprotein-like	Nucleoprotein	CATH (4.3.0)
A [auth P]	1.10.3570.10	Mainly Alpha	Orthogonal Bundle	Rhabdovirus nucleoprotein-like fold	Rhabdovirus nucleocapsid protein like domain	CATH (4.3.0)
A [auth P]	1.10.3610.10	Mainly Alpha	Orthogonal Bundle	Rhabdovirus nucleoprotein-like	Nucleoprotein	CATH (4.3.0)

SAbDab Antibody Annotation SAbDab Database Homepage

Chain	Chain Class	Chain Subclass	Chain Type	Antigen Name(s)	Provenance Source
B [auth p], BA [auth f], D [auth b], DA [auth g], F [auth q], B [auth p], BA [auth f], D [auth b], DA [auth g], F [auth q], FA [auth h], H [auth c], HA [auth i], J [auth r], JA [auth o], L [auth d], LA [auth j], N [auth s], NA [auth a], P [auth e], R [auth t], T [auth k], V [auth l], X [auth n], Z [auth m]	Heavy Chain	IGHV1	-	anti-vesicular stomatitis virus n vhh	SAbDab (2025-12-19)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth P], AA [auth F], C [auth B], CA [auth G], E [auth Q], A [auth P], AA [auth F], C [auth B], CA [auth G], E [auth Q], EA [auth H], G [auth C], GA [auth I], I [auth R], IA [auth O], K [auth D], KA [auth J], M [auth S], MA [auth A], O [auth E], Q [auth T], S [auth K], U [auth L], W [auth N], Y [auth M]	PF07686	Immunoglobulin V-set domain (V-set)	Immunoglobulin V-set domain	This domain is found in antibodies as well as neural protein P0 and CTL4 amongst others.	Domain
A [auth P], AA [auth F], C [auth B], CA [auth G], E [auth Q], A [auth P], AA [auth F], C [auth B], CA [auth G], E [auth Q], EA [auth H], G [auth C], GA [auth I], I [auth R], IA [auth O], K [auth D], KA [auth J], M [auth S], MA [auth A], O [auth E], Q [auth T], S [auth K], U [auth L], W [auth N], Y [auth M]	PF00945	Rhabdovirus nucleocapsid protein (Rhabdo_ncap)	Rhabdovirus nucleocapsid protein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
OA [auth u], PA [auth v], QA [auth w], RA [auth x]	RNA (45-MER)	-	-	-
B [auth p], BA [auth f], D [auth b], DA [auth g], F [auth q], B [auth p], BA [auth f], D [auth b], DA [auth g], F [auth q], FA [auth h], H [auth c], HA [auth i], J [auth r], JA [auth o], L [auth d], LA [auth j], N [auth s], NA [auth a], P [auth e], R [auth t], T [auth k], V [auth l], X [auth n], Z [auth m]	Anti-vesicular stomatitis virus N VHH	-	response to stimulus immune response immune system process adaptive immune response	protein-containing complex immunoglobulin complex cellular anatomical structure extracellular region
A [auth P], AA [auth F], C [auth B], CA [auth G], E [auth Q], A [auth P], AA [auth F], C [auth B], CA [auth G], E [auth Q], EA [auth H], G [auth C], GA [auth I], I [auth R], IA [auth O], K [auth D], KA [auth J], M [auth S], MA [auth A], O [auth E], Q [auth T], S [auth K], U [auth L], W [auth N], Y [auth M]	Nucleoprotein	RNA binding binding nucleic acid binding	viral gene expression viral process viral transcription nucleobase-containing compound metabolic process RNA replication RNA metabolic process metabolic process cellular process primary metabolic process macromolecule metabolic process nucleic acid metabolic process	protein-containing complex ribonucleoprotein complex viral nucleocapsid viral capsid virion component host cellular component host intracellular part cellular anatomical structure host cell cytoplasm host cell part host intracellular region other organism part helical viral capsid

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B [auth p], BA [auth f], D [auth b], DA [auth g], F [auth q], B [auth p], BA [auth f], D [auth b], DA [auth g], F [auth q], FA [auth h], H [auth c], HA [auth i], J [auth r], JA [auth o], L [auth d], LA [auth j], N [auth s], NA [auth a], P [auth e], R [auth t], T [auth k], V [auth l], X [auth n], Z [auth m]	IPR050199	Immunoglobulin Heavy Variable	Family
B [auth p], BA [auth f], D [auth b], DA [auth g], F [auth q], B [auth p], BA [auth f], D [auth b], DA [auth g], F [auth q], FA [auth h], H [auth c], HA [auth i], J [auth r], JA [auth o], L [auth d], LA [auth j], N [auth s], NA [auth a], P [auth e], R [auth t], T [auth k], V [auth l], X [auth n], Z [auth m]	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
B [auth p], BA [auth f], D [auth b], DA [auth g], F [auth q], B [auth p], BA [auth f], D [auth b], DA [auth g], F [auth q], FA [auth h], H [auth c], HA [auth i], J [auth r], JA [auth o], L [auth d], LA [auth j], N [auth s], NA [auth a], P [auth e], R [auth t], T [auth k], V [auth l], X [auth n], Z [auth m]	IPR036179	Immunoglobulin-like domain superfamily	Homologous Superfamily
B [auth p], BA [auth f], D [auth b], DA [auth g], F [auth q], B [auth p], BA [auth f], D [auth b], DA [auth g], F [auth q], FA [auth h], H [auth c], HA [auth i], J [auth r], JA [auth o], L [auth d], LA [auth j], N [auth s], NA [auth a], P [auth e], R [auth t], T [auth k], V [auth l], X [auth n], Z [auth m]	IPR013106	Immunoglobulin V-set domain	Domain
B [auth p], BA [auth f], D [auth b], DA [auth g], F [auth q], B [auth p], BA [auth f], D [auth b], DA [auth g], F [auth q], FA [auth h], H [auth c], HA [auth i], J [auth r], JA [auth o], L [auth d], LA [auth j], N [auth s], NA [auth a], P [auth e], R [auth t], T [auth k], V [auth l], X [auth n], Z [auth m]	IPR003599	Immunoglobulin domain subtype	Domain
B [auth p], BA [auth f], D [auth b], DA [auth g], F [auth q], B [auth p], BA [auth f], D [auth b], DA [auth g], F [auth q], FA [auth h], H [auth c], HA [auth i], J [auth r], JA [auth o], L [auth d], LA [auth j], N [auth s], NA [auth a], P [auth e], R [auth t], T [auth k], V [auth l], X [auth n], Z [auth m]	IPR007110	Immunoglobulin-like domain	Domain
A [auth P], AA [auth F], C [auth B], CA [auth G], E [auth Q], A [auth P], AA [auth F], C [auth B], CA [auth G], E [auth Q], EA [auth H], G [auth C], GA [auth I], I [auth R], IA [auth O], K [auth D], KA [auth J], M [auth S], MA [auth A], O [auth E], Q [auth T], S [auth K], U [auth L], W [auth N], Y [auth M]	IPR035961	Rhabdovirus nucleoprotein-like	Homologous Superfamily
A [auth P], AA [auth F], C [auth B], CA [auth G], E [auth Q], A [auth P], AA [auth F], C [auth B], CA [auth G], E [auth Q], EA [auth H], G [auth C], GA [auth I], I [auth R], IA [auth O], K [auth D], KA [auth J], M [auth S], MA [auth A], O [auth E], Q [auth T], S [auth K], U [auth L], W [auth N], Y [auth M]	IPR000448	Rhabdovirus nucleocapsid	Domain
A [auth P], AA [auth F], C [auth B], CA [auth G], E [auth Q], A [auth P], AA [auth F], C [auth B], CA [auth G], E [auth Q], EA [auth H], G [auth C], GA [auth I], I [auth R], IA [auth O], K [auth D], KA [auth J], M [auth S], MA [auth A], O [auth E], Q [auth T], S [auth K], U [auth L], W [auth N], Y [auth M]	IPR023330	Rhabdovirus nucleocapsid, N-terminal	Homologous Superfamily
A [auth P], AA [auth F], C [auth B], CA [auth G], E [auth Q], A [auth P], AA [auth F], C [auth B], CA [auth G], E [auth Q], EA [auth H], G [auth C], GA [auth I], I [auth R], IA [auth O], K [auth D], KA [auth J], M [auth S], MA [auth A], O [auth E], Q [auth T], S [auth K], U [auth L], W [auth N], Y [auth M]	IPR023331	Rhabdovirus nucleocapsid, C-terminal	Homologous Superfamily

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VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307

External Resource: Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Domain Annotation: ECOD Classification ECOD Database Homepage

Domain Annotation: CATH CATH Database Homepage

SAbDab Antibody Annotation SAbDab Database Homepage

Protein Family Annotation Pfam Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage

5UK4 | pdb_00005uk4