5VKF

RHCC in complex with Naphthalene

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad5vkfa1 Coiled coil proteins Parallel coiled-coil Tetrabrachion Tetrabrachion automated matches (Staphylothermus marinus ) [TaxId: 2280 ], SCOPe (2.08)
Ad5vkfa2 Artifacts Tags Tags Tags N-terminal Tags (Staphylothermus marinus ) [TaxId: 2280 ], SCOPe (2.08)
Cd5vkfc1 Coiled coil proteins Parallel coiled-coil Tetrabrachion Tetrabrachion automated matches (Staphylothermus marinus ) [TaxId: 2280 ], SCOPe (2.08)
Cd5vkfc2 Artifacts Tags Tags Tags N-terminal Tags (Staphylothermus marinus ) [TaxId: 2280 ], SCOPe (2.08)
Dd5vkfd1 Coiled coil proteins Parallel coiled-coil Tetrabrachion Tetrabrachion automated matches (Staphylothermus marinus ) [TaxId: 2280 ], SCOPe (2.08)
Dd5vkfd2 Artifacts Tags Tags Tags N-terminal Tags (Staphylothermus marinus ) [TaxId: 2280 ], SCOPe (2.08)
Bd5vkfb1 Coiled coil proteins Parallel coiled-coil Tetrabrachion Tetrabrachion automated matches (Staphylothermus marinus ) [TaxId: 2280 ], SCOPe (2.08)
Bd5vkfb2 Artifacts Tags Tags Tags N-terminal Tags (Staphylothermus marinus ) [TaxId: 2280 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyTetrabrachion 8039565 3001596 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyTetrabrachion 8039565 3001596 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyTetrabrachion 8039565 3001596 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyTetrabrachion 8039565 3001596 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ATetrabrachion_likee5vkfA1 A: extended segmentsX: AF1503 pre-HAMP domain (From Topology)H: AF1503 pre-HAMP domain (From Topology)T: AF1503 pre-HAMP domainF: Tetrabrachion_likeECOD (1.6)
CTetrabrachion_likee5vkfC1 A: extended segmentsX: AF1503 pre-HAMP domain (From Topology)H: AF1503 pre-HAMP domain (From Topology)T: AF1503 pre-HAMP domainF: Tetrabrachion_likeECOD (1.6)
DTetrabrachion_likee5vkfD1 A: extended segmentsX: AF1503 pre-HAMP domain (From Topology)H: AF1503 pre-HAMP domain (From Topology)T: AF1503 pre-HAMP domainF: Tetrabrachion_likeECOD (1.6)
BTetrabrachion_likee5vkfB1 A: extended segmentsX: AF1503 pre-HAMP domain (From Topology)H: AF1503 pre-HAMP domain (From Topology)T: AF1503 pre-HAMP domainF: Tetrabrachion_likeECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.20.5.1060 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces TetrabrachionCATH (4.3.0)
C1.20.5.1060 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces TetrabrachionCATH (4.3.0)
D1.20.5.1060 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces TetrabrachionCATH (4.3.0)
B1.20.5.1060 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces TetrabrachionCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF11401Tetrabrachion (Tetrabrachion)Tetrabrachion- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
Tetrabrachion- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR038065Tetrabrachion, parallel right-handed coiled coil domainHomologous Superfamily
A, B, C, D
IPR021535TetrabrachionFamily