5WP4 | pdb_00005wp4

Arabidopsis thaliana phosphoethanolamine N-methyltransferase 1 (AtPMT1, XIOPTL) in complex with SAH and phosphocholine

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Saf-Nte_pilin	e5wp4A1	A: alpha bundles	X: Protein kinase/SAICAR synthase/ATP-grasp	H: Protein kinase/SAICAR synthase/ATP-grasp	T: Undecaprenyl diphosphate synthase	F: Saf-Nte_pilin	ECOD (develop294)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF13847	Methyltransferase domain (Methyltransf_31)	Methyltransferase domain	This family appears to have methyltransferase activity.	Domain
A	PF08241	Methyltransferase domain (Methyltransf_11)	Methyltransferase domain	Members of this family are SAM dependent methyltransferases.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Phosphoethanolamine N-methyltransferase 1	transferase activity, transferring one-carbon groups N-methyltransferase activity transferase activity methyltransferase activity catalytic activity phosphoethanolamine N-methyltransferase activity S-adenosylmethionine-dependent methyltransferase activity	developmental process multi-multicellular organism process multicellular organismal process cellular developmental process pollination developmental cell growth developmental growth reproductive process growth unidimensional cell growth cell development cell tip growth developmental process involved in reproduction cell growth cell morphogenesis developmental process multi-multicellular organism process multicellular organismal process cellular developmental process pollination developmental cell growth developmental growth reproductive process growth unidimensional cell growth cell development cell tip growth developmental process involved in reproduction cell growth cell morphogenesis developmental growth involved in morphogenesis anatomical structure morphogenesis pollen tube growth cell differentiation anatomical structure development cellular process pollen tube development plant organ development post-embryonic root development multicellular organism development post-embryonic plant organ development post-embryonic development root development system development root system development glycerophospholipid biosynthetic process glycerophospholipid metabolic process lipid biosynthetic process primary metabolic process phospholipid biosynthetic process phospholipid metabolic process biosynthetic process glycerolipid biosynthetic process organophosphate metabolic process organophosphate biosynthetic process phosphate-containing compound metabolic process phosphatidylcholine metabolic process glycerolipid metabolic process metabolic process phosphatidylcholine biosynthetic process phosphorus metabolic process lipid metabolic process methylation gametophyte development pollen development positive chemotaxis chemotaxis response to stimulus pollen tube guidance response to external stimulus taxis response to chemical locomotion biogenic amine biosynthetic process amine metabolic process amine biosynthetic process choline biosynthetic process choline metabolic process biogenic amine metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Homologous Superfamily
A	IPR025771	Phosphoethanolamine N-methyltransferase	Family
A	IPR025714	Methyltransferase domain	Domain
A	IPR013216	Methyltransferase type 11	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.