5X11
Crystal structure of Bacillus subtilis PadR in complex with operator DNA
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
E [auth A] | PadR | e5x11A1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PadR | ECOD (1.6) |
F [auth B] | PadR | e5x11B1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PadR | ECOD (1.6) |
G [auth C] | PadR | e5x11C1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PadR | ECOD (1.6) |
H [auth D] | PadR | e5x11D1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PadR | ECOD (1.6) |
I [auth E] | PadR | e5x11E1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PadR | ECOD (1.6) |
J [auth F] | PadR | e5x11F1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PadR | ECOD (1.6) |
K [auth G] | PadR | e5x11G1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PadR | ECOD (1.6) |
L [auth H] | PadR | e5x11H1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PadR | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF10400 | Virulence activator alpha C-term (Vir_act_alpha_C) | Virulence activator alpha C-term | - | Family | |
PF03551 | Transcriptional regulator PadR-like family (PadR) | Transcriptional regulator PadR-like family | Members of this family are transcriptional regulators that appear to be related to the Pfam:PF01047 family. This family includes PadR Swiss:Q9EXE6 a protein that is involved in negative regulation of phenolic acid metabolism. | Domain |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily | |
IPR018309 | Transcription regulator PadR, C-terminal | Domain | |
IPR005149 | Transcription regulator PadR, N-terminal | Domain | |
IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily |