5XPB | pdb_00005xpb

Crystal Structure of Selenomethionine labelled Drep4 CIDE domain


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BbZIP_1e5xpbB1 A: alpha bundlesX: PriB N-terminal domain-likeH: ADP-ribosylationT: ADP-ribosylationF: bZIP_1ECOD (develop294)
EChlorophyllase2e5xpbE1 A: alpha bundlesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: Chlorophyllase2ECOD (develop294)
HChlorophyllase2e5xpbH1 A: alpha bundlesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: Chlorophyllase2ECOD (develop294)
IChlorophyllase2e5xpbI1 A: alpha bundlesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: Chlorophyllase2ECOD (develop294)
JChlorophyllase2e5xpbJ1 A: alpha bundlesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: Chlorophyllase2ECOD (develop294)
GChlorophyllase2e5xpbG1 A: alpha bundlesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: Chlorophyllase2ECOD (develop294)
FChlorophyllase2e5xpbF1 A: alpha bundlesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: Chlorophyllase2ECOD (develop294)
DChlorophyllase2e5xpbD1 A: alpha bundlesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: Chlorophyllase2ECOD (develop294)
CChlorophyllase2e5xpbC1 A: alpha bundlesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: Chlorophyllase2ECOD (develop294)
AChlorophyllase2e5xpbA1 A: alpha bundlesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: Chlorophyllase2ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.10.20.10 Alpha Beta Roll Ubiquitin-like (UB roll) CATH (4.3.0)
E3.10.20.10 Alpha Beta Roll Ubiquitin-like (UB roll) CATH (4.3.0)
H3.10.20.10 Alpha Beta Roll Ubiquitin-like (UB roll) CATH (4.3.0)
I3.10.20.10 Alpha Beta Roll Ubiquitin-like (UB roll) CATH (4.3.0)
J3.10.20.10 Alpha Beta Roll Ubiquitin-like (UB roll) CATH (4.3.0)
G3.10.20.10 Alpha Beta Roll Ubiquitin-like (UB roll) CATH (4.3.0)
F3.10.20.10 Alpha Beta Roll Ubiquitin-like (UB roll) CATH (4.3.0)
D3.10.20.10 Alpha Beta Roll Ubiquitin-like (UB roll) CATH (4.3.0)
C3.10.20.10 Alpha Beta Roll Ubiquitin-like (UB roll) CATH (4.3.0)
A3.10.20.10 Alpha Beta Roll Ubiquitin-like (UB roll) CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF02017CIDE-N domain (CIDE-N)CIDE-N domainThis domain is found in CAD nuclease Swiss:O76075 , ICAD Swiss:O00273 the inhibitor of CAD nuclease. The two proteins interact through this domain. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
DNAation factor-related protein 4

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR039729DNA fragmentation factor 40Family
A, B, C, D, E
IPR003508CIDE-N domainDomain
A, B, C, D, E
IPR044925His-Me finger superfamilyHomologous Superfamily
A, B, C, D, E
IPR015311DNA fragmentation factor 40, C-terminalDomain