Crystal structure of Notched-fin eelpout type III antifreeze protein (NFE6, AFP), P212121 form
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | d5xqpa_ | All beta proteins | beta-clip | AFP III-like domain | AFP III-like domain | automated matches | (Zoarces elongatus ) [TaxId: 291231 ], | SCOPe (2.08) |
| B | d5xqpb_ | All beta proteins | beta-clip | AFP III-like domain | AFP III-like domain | automated matches | (Zoarces elongatus ) [TaxId: 291231 ], | SCOPe (2.08) |
| C | d5xqpc_ | All beta proteins | beta-clip | AFP III-like domain | AFP III-like domain | automated matches | (Zoarces elongatus ) [TaxId: 291231 ], | SCOPe (2.08) |
| D | d5xqpd_ | All beta proteins | beta-clip | AFP III-like domain | AFP III-like domain | automated matches | (Zoarces elongatus ) [TaxId: 291231 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| A | SCOP2 Family | AFP III-like domain | 8078243 | 4002954 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | AFP III-like domain | 8078244 | 3001936 | SCOP2 (2022-06-29) |
| B | SCOP2B Superfamily | AFP III-like domain | 8078244 | 3001936 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | AFP III-like domain | 8078244 | 3001936 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | AFP III-like domain | 8078244 | 3001936 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | e5xqpA1 | A: OB-fold | X: Nucleic acid-binding protein | H: Nucleotidyltransferase | T: VP4_haemagglut | F: | ECOD (20:10:01) | |
| B | e5xqpB1 | A: OB-fold | X: Nucleic acid-binding protein | H: Nucleotidyltransferase | T: VP4_haemagglut | F: | ECOD (20:10:01) | |
| C | e5xqpC1 | A: OB-fold | X: Nucleic acid-binding protein | H: Nucleotidyltransferase | T: VP4_haemagglut | F: | ECOD (20:10:01) | |
| D | e5xqpD1 | A: OB-fold | X: Nucleic acid-binding protein | H: Nucleotidyltransferase | T: VP4_haemagglut | F: | ECOD (20:10:01) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 3.90.1210.10 | Alpha Beta | Alpha-Beta Complex | Type Iii Antifreeze Protein Isoform Hplc 12 | Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain | CATH (4.3.0) |
| B | 3.90.1210.10 | Alpha Beta | Alpha-Beta Complex | Type Iii Antifreeze Protein Isoform Hplc 12 | Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain | CATH (4.3.0) |
| C | 3.90.1210.10 | Alpha Beta | Alpha-Beta Complex | Type Iii Antifreeze Protein Isoform Hplc 12 | Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain | CATH (4.3.0) |
| D | 3.90.1210.10 | Alpha Beta | Alpha-Beta Complex | Type Iii Antifreeze Protein Isoform Hplc 12 | Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Ice-structuring protein | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR036732 | Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily | Homologous Superfamily | |
| IPR013974 | SAF domain | Domain | |
| IPR006190 | Antifreeze-like/N-acetylneuraminic acid synthase, SAF domain | Domain | |
| IPR006013 | Antifreeze, type III | Family |
Membrane Protein Annotation: OPM OPM Database Homepage
| Chains | External Link | Type | Class | Superfamily | Family |
|---|---|---|---|---|---|
| OPM | Monotopic/peripheral | Alpha + Beta monotopic/peripheral | Type III antifreeze protein | Type III antifreeze protein |
