Annotations: 5Y28

Crystal structure of H. pylori HtrA with PDZ2 deletion

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
C	SCOP2B Superfamily	Trypsin-like serine proteases	8089446	3000114	SCOP2B (2022-06-29)
B	SCOP2 Family	Prokaryotic proteases	8089445	4002151	SCOP2 (2022-06-29)
B	SCOP2 Superfamily	Trypsin-like serine proteases	8089446	3000114	SCOP2 (2022-06-29)
A	SCOP2B Superfamily	Trypsin-like serine proteases	8089446	3000114	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C	PK_Tyr_Ser-Thr	e5y28C1	A: alpha arrays	X: Major facilitator superfamily (MFS) general substrate transporter	H: Major facilitator superfamily (MFS) general substrate transporter	T: Major facilitator superfamily (MFS) general substrate transporter	F: PK_Tyr_Ser-Thr	ECOD (v295)
B	Hemocyanin_C	e5y28B1	A: alpha arrays	X: Surp module (SWAP domain)	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: Hemocyanin_C	ECOD (v295)
A	Hemocyanin_C	e5y28A1	A: alpha arrays	X: Surp module (SWAP domain)	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: Hemocyanin_C	ECOD (v295)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	2.40.10.120	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
D [auth G]	UNK-UNK-UNK-UNK	-	-	-
A, B, C	Periplasmic serine endoprotease DegP-like	peptidase activity catalytic activity, acting on a protein serine hydrolase activity serine-type peptidase activity hydrolase activity serine-type endopeptidase activity catalytic activity endopeptidase activity	proteolysis metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C	IPR011782	Peptidase S1C, Do-like	Family
A, B, C	IPR051201	Chloroplastic and Bacterial Serine Proteases	Family
A, B, C	IPR009003	Peptidase S1, PA clan	Homologous Superfamily
A, B, C	IPR001478	PDZ domain	Domain
A, B, C	IPR001940	Peptidase S1C	Family
A, B, C	IPR036034	PDZ superfamily	Homologous Superfamily

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