Crystal structure of Raphanus sativus AGDP1 AGD12 in complex with an H3K9me2 peptide
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C [auth B] | Metallophos | e5zwxB1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: Metallophos | ECOD (v294.1) |
| A | RRM_1 | e5zwxA1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: HTH | T: SH3 | F: RRM_1 | ECOD (v294.1) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| A, C [auth B] | IPR008395 | Agenet-like domain | Domain |
| A, C [auth B] | IPR014002 | Agenet domain, plant type | Domain |
| B [auth P], D [auth Q] | IPR009072 | Histone-fold | Homologous Superfamily |
| B [auth P], D [auth Q] | IPR007125 | Core Histone H2A/H2B/H3 domain | Domain |
| B [auth P], D [auth Q] | IPR000164 | Histone H3/CENP-A | Family |
Protein Modification Annotation
| Modified Residue(s) | ||
|---|---|---|
| Chain | Residue(s) | Description |
| A, C [auth B] | MSE | Parent Component: MET |
| B [auth P], D [auth Q] | MLY | Parent Component: LYS :  AA0075 :  N6,N6-dimethyl-L-lysine MOD:00084 |














