Crystal structure of SmgGDS-558 and farnesylated RhoA complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| E [auth e] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8057414 | 3002022 | SCOP2B (2022-06-29) |
| F [auth f] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8057414 | 3002022 | SCOP2B (2022-06-29) |
| G [auth g] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8057414 | 3002022 | SCOP2B (2022-06-29) |
| H [auth h] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8057414 | 3002022 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | TPR_7, TPR_10, TPR_12, SNAP | e5zhxA1 | A: alpha bundles | X: PriB N-terminal domain-like | H: ADP-ribosylation | T: ADP-ribosylation | F: TPR_7, TPR_10, TPR_12, SNAP | ECOD (develop294) |
| B | Chlorophyllase2 | e5zhxB1 | A: alpha bundles | X: PriB N-terminal domain-like | H: gp11/gp12 receptor-binding domain | T: gp11/gp12 receptor-binding domain | F: Chlorophyllase2 | ECOD (develop294) |
| C | Chlorophyllase2 | e5zhxC1 | A: alpha bundles | X: PriB N-terminal domain-like | H: gp11/gp12 receptor-binding domain | T: gp11/gp12 receptor-binding domain | F: Chlorophyllase2 | ECOD (develop294) |
| D | Chlorophyllase2 | e5zhxD1 | A: alpha bundles | X: PriB N-terminal domain-like | H: gp11/gp12 receptor-binding domain | T: gp11/gp12 receptor-binding domain | F: Chlorophyllase2 | ECOD (develop294) |
| E [auth e] | TPR_7, TPR_10, TPR_12, SNAP | e5zhxe1 | A: alpha bundles | X: PriB N-terminal domain-like | H: ADP-ribosylation | T: ADP-ribosylation | F: TPR_7, TPR_10, TPR_12, SNAP | ECOD (develop294) |
| F [auth f] | TPR_7, TPR_10, TPR_12, SNAP | e5zhxf1 | A: alpha bundles | X: PriB N-terminal domain-like | H: ADP-ribosylation | T: ADP-ribosylation | F: TPR_7, TPR_10, TPR_12, SNAP | ECOD (develop294) |
| G [auth g] | Chlorophyllase2 | e5zhxg1 | A: alpha bundles | X: PriB N-terminal domain-like | H: gp11/gp12 receptor-binding domain | T: gp11/gp12 receptor-binding domain | F: Chlorophyllase2 | ECOD (develop294) |
| H [auth h] | Chlorophyllase2 | e5zhxh1 | A: alpha bundles | X: PriB N-terminal domain-like | H: gp11/gp12 receptor-binding domain | T: gp11/gp12 receptor-binding domain | F: Chlorophyllase2 | ECOD (develop294) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| E [auth e] | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (utative) |
| F [auth f] | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (utative) |
| G [auth g] | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (utative) |
| H [auth h] | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR040144 | Rap1 GTPase-GDP dissociation stimulator 1 | Family | |
| IPR016024 | Armadillo-type fold | Homologous Superfamily | |
| IPR000225 | Armadillo | Repeat | |
| IPR011989 | Armadillo-like helical | Homologous Superfamily | |
| E [auth e], F [auth f], G [auth g], H [auth h] | IPR001806 | Small GTPase | Family |
| E [auth e], F [auth f], G [auth g], H [auth h] | IPR003578 | Small GTPase Rho | Family |
| E [auth e], F [auth f], G [auth g], H [auth h] | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |
| E [auth e], F [auth f], G [auth g], H [auth h] | IPR005225 | Small GTP-binding domain | Domain |














