6BMS | pdb_00006bms

Palmitoyltransferase structure

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: OPM
Membrane Protein Annotation: PDBTM
Membrane Protein Annotation: MemProtMD
Membrane Protein Annotation: mpstruc

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	e6bmsA1	A: OB-fold	X: Nucleic acid-binding protein	H: Nucleotidyltransferase	T: Trypan_glycop	F:	ECOD (20:10:01)
A	e6bmsA2	A: L-aspartase middle domain-like	X: gp11/gp12 receptor-binding domain	H: gp11/gp12 receptor-binding domain	T: Cadherin	F:	ECOD (20:10:01)
B [auth D]	e6bmsD2	A: L-aspartase middle domain-like	X: gp11/gp12 receptor-binding domain	H: gp11/gp12 receptor-binding domain	T: Cadherin	F:	ECOD (20:10:01)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B [auth D]	PF01529	DHHC palmitoyltransferase (DHHC)	DHHC palmitoyltransferase	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B [auth D]	Palmitoyltransferase	cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding protein-cysteine S-stearoyltransferase activity protein-cysteine S-acyltransferase activity catalytic activity, acting on a protein acyltransferase activity acyltransferase activity, transferring groups other than amino-acyl groups transferase activity S-acyltransferase activity cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding protein-cysteine S-stearoyltransferase activity protein-cysteine S-acyltransferase activity catalytic activity, acting on a protein acyltransferase activity acyltransferase activity, transferring groups other than amino-acyl groups transferase activity S-acyltransferase activity catalytic activity protein-cysteine S-palmitoyltransferase activity palmitoyltransferase activity myristoyltransferase activity protein-cysteine S-myristoyltransferase activity	localization cellular localization macromolecule localization cellular process intracellular protein localization localization within membrane protein localization to membrane establishment of protein localization establishment of protein localization to organelle protein targeting protein targeting to Golgi apparatus establishment of localization establishment of protein localization to membrane protein targeting to membrane localization cellular localization macromolecule localization cellular process intracellular protein localization localization within membrane protein localization to membrane establishment of protein localization establishment of protein localization to organelle protein targeting protein targeting to Golgi apparatus establishment of localization establishment of protein localization to membrane protein targeting to membrane vesicle organization cellular component organization developmental process synaptic vesicle maturation organelle organization cellular component organization or biogenesis developmental maturation	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure Golgi apparatus organelle cytoplasm intracellular membrane-bounded organelle endomembrane system Golgi membrane membrane bounding membrane of organelle organelle membrane postsynaptic density membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure Golgi apparatus organelle cytoplasm intracellular membrane-bounded organelle endomembrane system Golgi membrane membrane bounding membrane of organelle organelle membrane postsynaptic density postsynapse neuron to neuron synapse postsynaptic specialization synapse cell junction asymmetric synapse endoplasmic reticulum

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B [auth D]	IPR001594	Palmitoyltransferase, DHHC domain	Domain
A, B [auth D]	IPR039859	Palmitoyltransferase PFA4/ZDHHC16/ZDHHC20/ERF2-like	Family

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A, B [auth D]	OPM	Transmembrane	Alpha-helical polytopic	DHHC palmitoyltransferase	DHHC palmitoyltransferase

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Chains	External Link	Comment
A, B [auth D]	PDBTM	Annotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

Chains	External Link	Comment
A, B [auth D]	MemProtMD	Annotated as membrane protein by MemProtMD

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
A, B [auth D]	mpstruc	TRANSMEMBRANE PROTEINS: ALPHA-HELICAL	S-acyltransferases	DHHC palmitoyltransferase, P2₁ space group

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

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