6GL5 | pdb_00006gl5

Crystal Structure of dimethylated RSL - sulfonatocalix[4]arene complex


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Ce6gl5C1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Peptidase_C1, Peptidase_C1_2F:ECOD (20:10:01)
Be6gl5B1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Peptidase_C1, Peptidase_C1_2F:ECOD (20:10:01)
Ae6gl5A1 A: Ten stranded beta/alpha barrelX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Glyco_hydro_32NF:ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
C2.40.128.190 Mainly Beta Beta Barrel Lipocalin CATH (utative)
B2.40.128.190 Mainly Beta Beta Barrel Lipocalin CATH (utative)
A2.40.128.190 Mainly Beta Beta Barrel Lipocalin CATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C
Fucose-binding lectin protein - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C
IPR012475Fucose-specific lectinFamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A, B, C
MLY Parent Component: LYS

RESIDAA0075

PSI-MOD :  N6,N6-dimethyl-L-lysine MOD:00084
A, B, C
SNM Parent Component: SER

RESIDAA0075