6HKW | pdb_00006hkw

Crystal structure of human SDS22

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Phage_cap_E	e6hkwA1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Phage_cap_E	ECOD (v294.1)
B	Phage_cap_E	e6hkwB1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Phage_cap_E	ECOD (v294.1)
C	Phage_cap_E	e6hkwC1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Phage_cap_E	ECOD (v294.1)
D	Phage_cap_E	e6hkwD1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Phage_cap_E	ECOD (v294.1)
E	Phage_cap_E	e6hkwE1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Phage_cap_E	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E	PF14580	Leucine-rich repeat (LRR_9)	Leucine-rich repeat	-	Repeat
A, B, C, D, E	PF12799	Leucine Rich repeats (2 copies) (LRR_4)	Leucine Rich repeats (2 copies)	-	Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E	Protein phosphatase 1 regulatory subunit 7	enzyme regulator activity molecular function regulator activity phosphatase regulator activity protein phosphatase regulator activity	-	intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle chromosome cytoplasm extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region extracellular space intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle chromosome cytoplasm extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region extracellular space vesicle extracellular membrane-bounded organelle nucleus intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E	IPR025875	Leucine rich repeat 4	Repeat
A, B, C, D, E	IPR032675	Leucine-rich repeat domain superfamily	Homologous Superfamily
A, B, C, D, E	IPR001611	Leucine-rich repeat	Repeat
A, B, C, D, E	IPR050576	Ciliary and flagellar integrity-associated protein	Family
A, B, C, D, E	IPR003591	Leucine-rich repeat, typical subtype	Repeat
A, B, C, D, E	IPR003603	U2A'/phosphoprotein 32 family A, C-terminal	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B, C, D, E	Pharos: Q15435	astrocytic tumor glioblastoma malignant glioma plasma cell myeloma Sjogren syndrome atypical teratoid rhabdoid tumor large cell medulloblastoma medulloblastoma prostate carcinoma dermatomyositis lymphoplasmacytic lymphoma ovarian cancer psoriasis

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.