Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
CSCOP2B SuperfamilyNADH-quinone oxidoreductase, subunit 11-like 8106707 3002200 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyAntiporter subunits half-channel-like 8093348 3002280 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyAntiporter subunits half-channel-like 8059300 3002280 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyNADH-quinone oxidoreductase, subunit 11-like 8060883 3002200 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyAntiporter subunits half-channel-like 8093351 3002280 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyAntiporter subunits half-channel-like 8059304 3002280 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyHydB/Nqo4-like 8085741 3001849 SCOP2B (2022-06-29)
RSCOP2B Superfamily2Fe-2S ferredoxin-like 8034515 3000113 SCOP2B (2022-06-29)
SSCOP2B SuperfamilyElectron transport accessory proteins 8103000 3000325 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ANADHdhe6l7oA1 A: alpha complex topologyX: Sodium/proton antiporter subunits-like (From Homology)H: Sodium/proton antiporter subunits-likeT: NADH-quinone oxidoreductase subunit 8 (Nqo8)-relatedF: NADHdhECOD (1.6)
BProton_antipo_Me6l7oB1 A: alpha complex topologyX: Sodium/proton antiporter subunits-like (From Homology)H: Sodium/proton antiporter subunits-likeT: NADH-quinone oxidoreductase subunit L (NuoL)-relatedF: Proton_antipo_MECOD (1.6)
COxidored_q4e6l7oC1 A: extended segmentsX: NADH-quinone oxidoreductase subunit A (From Topology)H: NADH-quinone oxidoreductase subunit A (From Topology)T: NADH-quinone oxidoreductase subunit AF: Oxidored_q4ECOD (1.6)
DProton_antipo_Me6l7oD1 A: alpha complex topologyX: Sodium/proton antiporter subunits-like (From Homology)H: Sodium/proton antiporter subunits-likeT: NADH-quinone oxidoreductase subunit L (NuoL)-relatedF: Proton_antipo_MECOD (1.6)
EOxidored_q2e6l7oE1 A: alpha complex topologyX: NADH-quinone oxidoreductase subunit K (From Topology)H: NADH-quinone oxidoreductase subunit K (From Topology)T: NADH-quinone oxidoreductase subunit KF: Oxidored_q2ECOD (1.6)
FProton_antipo_Me6l7oF1 A: alpha complex topologyX: Sodium/proton antiporter subunits-like (From Homology)H: Sodium/proton antiporter subunits-likeT: NADH-quinone oxidoreductase subunit L (NuoL)-relatedF: Proton_antipo_MECOD (1.6)
GOxidored_q3e6l7oG1 A: extended segmentsX: NADH-quinone oxidoreductase subunit J (From Topology)H: NADH-quinone oxidoreductase subunit J (From Topology)T: NADH-quinone oxidoreductase subunit JF: Oxidored_q3ECOD (1.6)
HComplex1_49kDa_1ste6l7oH2 A: alpha complex topologyX: alpha-helical domain in nickel-iron hydrogenase, large subunit (From Topology)H: alpha-helical domain in nickel-iron hydrogenase, large subunit (From Topology)T: alpha-helical domain in nickel-iron hydrogenase, large subunitF: Complex1_49kDa_1stECOD (1.6)
HNuoDe6l7oH1 A: a+b two layersX: FAD-linked reductases, C-terminal domain-likeH: Ni-Fe binding domain in nickel-iron hydrogenase large subunit (From Topology)T: Ni-Fe binding domain in nickel-iron hydrogenase large subunitF: NuoDECOD (1.6)
HComplex1_49kDa_2nde6l7oH3 A: a+b two layersX: FAD-linked reductases, C-terminal domain-likeH: Ni-Fe binding domain in nickel-iron hydrogenase large subunit (From Topology)T: Ni-Fe binding domain in nickel-iron hydrogenase large subunitF: Complex1_49kDa_2ndECOD (1.6)
IFer4_21_1e6l7oI1 A: a+b two layersX: 4Fe-4S ferredoxin (From Topology)H: 4Fe-4S ferredoxin (From Topology)T: 4Fe-4S ferredoxinF: Fer4_21_1ECOD (1.6)
JComplex1_30kDae6l7oJ1 A: a+b two layersX: Nqo5-likeH: Nqo5-like (From Topology)T: Nqo5-likeF: Complex1_30kDaECOD (1.6)
OUNK_F_TYPEe6l7oO1 A: beta barrelsX: SH3H: SH3T: SH3F: UNK_F_TYPEECOD (1.6)
RFer2e6l7oR1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: Fer2ECOD (1.6)
SNdhSe6l7oS1 A: beta barrelsX: SH3H: SH3T: SH3F: NdhSECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
E1.10.287.3510 Mainly Alpha Orthogonal Bundle Helix Hairpins CATH (utative)
S2.30.30.140 Mainly Beta Roll SH3 type barrels. CATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00146NADH dehydrogenase (NADHdh)NADH dehydrogenase- Family
PF19530NAD(P)H-quinone oxidoreductase subunit 2 N-terminal (Ndh2_N)NAD(P)H-quinone oxidoreductase subunit 2 N-terminalThis domain represents the N-terminal of NAD(P)H-quinone oxidoreductase subunit 2 (or subunit B), part of the P-module (pumping) of the photosynthetic complex I from plants and cyanobacteria, which is structurally and functionally related to the resp ...This domain represents the N-terminal of NAD(P)H-quinone oxidoreductase subunit 2 (or subunit B), part of the P-module (pumping) of the photosynthetic complex I from plants and cyanobacteria, which is structurally and functionally related to the respiratory complex I from mitochondria and bacteria. It is involved in the electron transfer between photosynthetic complex I and photosystem I [1].
Domain
PF00361Proton-conducting membrane transporter (Proton_antipo_M)Proton-conducting membrane transporter- Family
PF00507NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 (Oxidored_q4)NADH-ubiquinone/plastoquinone oxidoreductase, chain 3- Family
PF00361Proton-conducting membrane transporter (Proton_antipo_M)Proton-conducting membrane transporter- Family
PF00420NADH-ubiquinone/plastoquinone oxidoreductase chain 4L (Oxidored_q2)NADH-ubiquinone/plastoquinone oxidoreductase chain 4L- Family
PF00361Proton-conducting membrane transporter (Proton_antipo_M)Proton-conducting membrane transporter- Family
PF01010NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus (Proton_antipo_C)NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus- Family
PF00662NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus (Proton_antipo_N)NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus- Family
PF00499NADH-ubiquinone/plastoquinone oxidoreductase chain 6 (Oxidored_q3)NADH-ubiquinone/plastoquinone oxidoreductase chain 6- Family
PF00346Respiratory-chain NADH dehydrogenase, 49 Kd subunit (Complex1_49kDa)Respiratory-chain NADH dehydrogenase, 49 Kd subunit- Family
PF128384Fe-4S dicluster domain (Fer4_7)4Fe-4S dicluster domainSuperfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contai ...Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contains two 4Fe4S clusters.
Domain
PF00329Respiratory-chain NADH dehydrogenase, 30 Kd subunit (Complex1_30kDa)Respiratory-chain NADH dehydrogenase, 30 Kd subunit- Family
PF01058NADH ubiquinone oxidoreductase, 20 Kd subunit (Oxidored_q6)NADH ubiquinone oxidoreductase, 20 Kd subunit- Family
PF10664Cyanobacterial and plastid NDH-1 subunit M (NdhM)Cyanobacterial and plastid NDH-1 subunit M- Family
PF11910Cyanobacterial and plant NDH-1 subunit O (NdhO)Cyanobacterial and plant NDH-1 subunit O- Family
PF001112Fe-2S iron-sulfur cluster binding domain (Fer2)2Fe-2S iron-sulfur cluster binding domain- Domain
PF11623NAD(P)H dehydrogenase subunit S (NdhS)NAD(P)H dehydrogenase subunit S- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
NAD(P)H-quinone oxidoreductase subunit 1
NAD(P)H-quinone oxidoreductase subunit 2
NAD(P)H-quinone oxidoreductase subunit 3
NAD(P)H-quinone oxidoreductase chain 4 1
NAD(P)H-quinone oxidoreductase subunit 4L
NADH dehydrogenase subunit 5
NADH-quinone oxidoreductase subunit J -
NAD(P)H-quinone oxidoreductase subunit H
NAD(P)H-quinone oxidoreductase subunit I
NAD(P)H-quinone oxidoreductase subunit J
NAD(P)H-quinone oxidoreductase subunit K
NAD(P)H-quinone oxidoreductase subunit L -
NAD(P)H-quinone oxidoreductase subunit M -
NAD(P)H-quinone oxidoreductase subunit N -
NAD(P)H-quinone oxidoreductase subunit O -
NAD(P)H-quinone oxidoreductase subunit P- -
NAD(P)H-quinone oxidoreductase subunit Q- -
Ferredoxin-1 -
Tlr0636 protein- -
T [auth V]Tlr0472 protein- - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR001694NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit HFamily
IPR018086NADH:ubiquinone oxidoreductase, subunit 1, conserved siteConserved Site
IPR010096NAD(P)H-quinone oxidoreductase, subunit N/subunit 2Family
IPR001750NADH:quinone oxidoreductase/Mrp antiporter, membrane subunitDomain
IPR045693NAD(P)H-quinone oxidoreductase subunit 2, N-terminalDomain
IPR023043NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastidFamily
IPR000440NADH:ubiquinone/plastoquinone oxidoreductase, chain 3Family
IPR038430NADH:ubiquinone oxidoreductase, subunit 3 superfamilyHomologous Superfamily
IPR022997NADH-quinone oxidoreductase chain 4Family
IPR003918NADH:ubiquinone oxidoreductaseFamily
IPR010227NADH-quinone oxidoreductase, chain M/4Family
IPR001750NADH:quinone oxidoreductase/Mrp antiporter, membrane subunitDomain
IPR001133NADH-ubiquinone oxidoreductase chain 4L/KFamily
IPR039428NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-likeFamily
IPR003945NADH-quinone oxidoreductase, chain 5-likeFamily
IPR002128NADH:ubiquinone/plastoquinone oxidoreductase, chloroplast chain 5, C-terminalDomain
IPR001516NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminalDomain
IPR001750NADH:quinone oxidoreductase/Mrp antiporter, membrane subunitDomain
IPR018393NADH-plastoquinone oxidoreductase, chain 5 subgroupFamily
IPR042106NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJHomologous Superfamily
IPR001457NADH:ubiquinone/plastoquinone oxidoreductase, chain 6Family
IPR022885NAD(P)H-quinone oxidoreductase subunit D/HFamily
IPR014029NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved siteConserved Site
IPR029014[NiFe]-hydrogenase, large subunitHomologous Superfamily
IPR001135NADH-quinone oxidoreductase, subunit DDomain
IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved siteConserved Site
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainDomain
IPR004497NAD(P)H-quinone oxidoreductase subunit IFamily
IPR010226NADH-quinone oxidoreductase, chain IFamily
IPR037232NADH:ubiquinone oxidoreductase, 30kDa subunit superfamilyHomologous Superfamily
IPR001268NADH:ubiquinone oxidoreductase, 30kDa subunitDomain
IPR020396NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved siteConserved Site
IPR010218NADH dehydrogenase, subunit CFamily
IPR006138NADH-ubiquinone oxidoreductase, 20 Kd subunitFamily
IPR006137NADH:ubiquinone oxidoreductase-like, 20kDa subunitDomain
IPR019654NAD(P)H-quinone oxidoreductase subunit LFamily
IPR018922NAD(P)H-quinone oxidoreductase subunit MFamily
IPR020874NAD(P)H-quinone oxidoreductase, subunit NFamily
IPR020905NAD(P)H-quinone oxidoreductase subunit OFamily
IPR0360102Fe-2S ferredoxin-like superfamilyHomologous Superfamily
IPR010241Ferredoxin [2Fe-2S], plantFamily
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainDomain
IPR012675Beta-grasp domain superfamilyHomologous Superfamily
IPR0060582Fe-2S ferredoxin, iron-sulphur binding siteBinding Site
IPR021659NADH dehydrogenase-like complex, subunit SFamily
T [auth V]IPR021374Protein of unknown function DUF2996Family