Rabbit 80S ribosome with Z-site tRNA and IFRD2 (unrotated state)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| F [auth B] | SCOP2B Superfamily | Translational proteins | 8078357 | 3000811 | SCOP2B (2022-06-29) |
| G [auth C] | SCOP2B Superfamily | 60S ribosomal protein L4 C-terminal domain-like | 8052828 | 3002143 | SCOP2B (2022-06-29) |
| G [auth C] | SCOP2B Superfamily | Ribosomal protein L4 | 8052829 | 3001146 | SCOP2B (2022-06-29) |
| Q [auth N] | SCOP2B Superfamily | Ribosomal proteins S24e, L23 and L15e | 8082477 | 3000210 | SCOP2B (2022-06-29) |
| Y [auth V] | SCOP2B Superfamily | 50S Ribosomal protein L14-like | 8072048 | 3000433 | SCOP2B (2022-06-29) |
| BA [auth Y] | SCOP2B Superfamily | Translation proteins SH3-like KOW motif containing domain | 8076754 | 3000334 | SCOP2B (2022-06-29) |
| CA [auth Z] | SCOP2B Superfamily | Translation proteins SH3-like KOW motif containing domain | 8053047 | 3000334 | SCOP2B (2022-06-29) |
| DA [auth a] | SCOP2B Superfamily | Ribosomal proteins L15p and L18e | 8097818 | 3001045 | SCOP2B (2022-06-29) |
| FA [auth c] | SCOP2B Superfamily | L30e-like | 8094953 | 3001739 | SCOP2B (2022-06-29) |
| IA [auth f] | SCOP2B Superfamily | Translational proteins | 8093714 | 3000811 | SCOP2B (2022-06-29) |
| LA [auth i] | SCOP2B Superfamily | Ribosomal protein L36e | 8053119 | 3002161 | SCOP2B (2022-06-29) |
| OA [auth l] | SCOP2B Superfamily | Ribosomal protein L39e | 8095597 | 3001756 | SCOP2B (2022-06-29) |
| UA [auth u] | SCOP2B Superfamily | Ribosomal protein L1p/L10e-like | 8065344 | 3001911 | SCOP2B (2022-06-29) |
| CB [auth FF] | SCOP2B Superfamily | Ribosomal protein S7 | 8066001 | 3000799 | SCOP2B (2022-06-29) |
| HB [auth KK] | SCOP2B Superfamily | Winged helix DNA-binding domain | 8055720 | 3000034 | SCOP2B (2022-06-29) |
| IB [auth LL] | SCOP2B Superfamily | Ribosomal S17 N-terminal domain-like | 8052708 | 3002138 | SCOP2B (2022-06-29) |
| IB [auth LL] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8052707 | 3000135 | SCOP2B (2022-06-29) |
| JB [auth MM] | SCOP2B Superfamily | L30e-like | 8063980 | 3001739 | SCOP2B (2022-06-29) |
| KB [auth NN] | SCOP2B Superfamily | Homeodomain-like | 8052970 | 3000001 | SCOP2B (2022-06-29) |
| KB [auth NN] | SCOP2B Superfamily | S15/NS1 RNA-binding domain | 8052971 | 3001284 | SCOP2B (2022-06-29) |
| PB [auth SS] | SCOP2B Superfamily | S13-like H2TH domain | 8101439 | 3000053 | SCOP2B (2022-06-29) |
| TB [auth WW] | SCOP2B Superfamily | Ribosomal protein S8 | 8079081 | 3000709 | SCOP2B (2022-06-29) |
| WB [auth ZZ] | SCOP2B Superfamily | Winged helix DNA-binding domain | 8090991 | 3000034 | SCOP2B (2022-06-29) |
| ZB [auth cc] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8095265 | 3000135 | SCOP2B (2022-06-29) |
| AC [auth dd] | SCOP2B Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8052584 | 3000068 | SCOP2B (2022-06-29) |
| BC [auth ee] | SCOP2B Superfamily | Ribosomal protein S30e-like | 8053455 | 3002190 | SCOP2B (2022-06-29) |
| YA [auth BB] | SCOP2B Superfamily | Ribosomal S3Ae-like | 8053216 | 3002166 | SCOP2B (2022-06-29) |
| SA [auth p] | SCOP2B Superfamily | Zn-binding ribosomal proteins | 8101435 | 3001320 | SCOP2B (2022-06-29) |
| HA [auth e] | SCOP2B Superfamily | Ribosomal protein L32e | 8102088 | 3000982 | SCOP2B (2022-06-29) |
| N [auth J] | SCOP2B Superfamily | RL5-like | 8073894 | 3001709 | SCOP2B (2022-06-29) |
| M [auth I] | SCOP2B Superfamily | Ribosomal protein L16p/L10e | 8097320 | 3000884 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| E [auth A] | e6mtcA1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Ribosomal_L1 | F: | ECOD (20:10:01) | |
| F [auth B] | e6mtcB1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Ribosomal_L1 | F: | ECOD (20:10:01) | |
| G [auth C] | e6mtcC1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Class I glutamine amidotransferase-like | T: Ephrin_lbd | F: | ECOD (20:10:01) | |
| H [auth D] | e6mtcD1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Ribosomal_L1 | F: | ECOD (20:10:01) | |
| I [auth E] | e6mtcE1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Ribosomal_L1 | F: | ECOD (20:10:01) | |
| J [auth F] | e6mtcF1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Ribosomal_L1 | F: | ECOD (20:10:01) | |
| K [auth G] | e6mtcG1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Ribosomal_L1 | F: | ECOD (20:10:01) | |
| L [auth H] | e6mtcH1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Ribosomal_L1 | F: | ECOD (20:10:01) | |
| O [auth L] | e6mtcL1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Ribosomal_L1 | F: | ECOD (20:10:01) | |
| P [auth M] | e6mtcM1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Ribosomal_L1 | F: | ECOD (20:10:01) | |
| Q [auth N] | e6mtcN1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Ribosomal_L1 | F: | ECOD (20:10:01) | |
| R [auth O] | e6mtcO1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Ribosomal_L1 | F: | ECOD (20:10:01) | |
| S [auth P] | e6mtcP1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Ribosomal_L1 | F: | ECOD (20:10:01) | |
| T [auth Q] | e6mtcQ1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Ribosomal_L1 | F: | ECOD (20:10:01) | |
| U [auth R] | e6mtcR1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Ribosomal_L1 | F: | ECOD (20:10:01) | |
| V [auth S] | e6mtcS1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Ribosomal_L1 | F: | ECOD (20:10:01) | |
| X [auth U] | e6mtcU1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Ribosomal_L1 | F: | ECOD (20:10:01) | |
| Y [auth V] | e6mtcV1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Ribosomal_L1 | F: | ECOD (20:10:01) | |
| Z [auth W] | e6mtcW1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Ribosomal_L1 | F: | ECOD (20:10:01) | |
| AA [auth X] | e6mtcX1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Ribosomal_L1 | F: | ECOD (20:10:01) | |
| BA [auth Y] | e6mtcY1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Ribosomal_L1 | F: | ECOD (20:10:01) | |
| CA [auth Z] | e6mtcZ1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Ribosomal_L1 | F: | ECOD (20:10:01) | |
| DA [auth a] | e6mtca1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Ribosomal_L1 | F: | ECOD (20:10:01) | |
| EA [auth b] | e6mtcb1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Ribosomal_L1 | F: | ECOD (20:10:01) | |
| FA [auth c] | e6mtcc1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Ribosomal_L1 | F: | ECOD (20:10:01) | |
| GA [auth d] | e6mtcd1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Ribosomal_L1 | F: | ECOD (20:10:01) | |
| IA [auth f] | e6mtcf1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Ribosomal_L1 | F: | ECOD (20:10:01) | |
| JA [auth g] | e6mtcg1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Ribosomal_L1 | F: | ECOD (20:10:01) | |
| KA [auth h] | e6mtch1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Ribosomal_L1 | F: | ECOD (20:10:01) | |
| LA [auth i] | e6mtci1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Ribosomal_L1 | F: | ECOD (20:10:01) | |
| MA [auth j] | e6mtcj1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Ribosomal_L1 | F: | ECOD (20:10:01) | |
| NA [auth k] | e6mtck1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Ribosomal_L1 | F: | ECOD (20:10:01) | |
| OA [auth l] | e6mtcl1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Ribosomal_L1 | F: | ECOD (20:10:01) | |
| PA [auth m] | e6mtcm1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Ribosomal_L1 | F: | ECOD (20:10:01) | |
| QA [auth n] | e6mtcn1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Ribosomal_L1 | F: | ECOD (20:10:01) | |
| TA [auth r] | e6mtcr1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Ribosomal_L1 | F: | ECOD (20:10:01) | |
| UA [auth u] | e6mtcu1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Ribosomal_L1 | F: | ECOD (20:10:01) | |
| VA [auth v] | e6mtcv1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Metallophos | F: | ECOD (20:10:01) | |
| ZA [auth CC] | e6mtcCC1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Metallophos | F: | ECOD (20:10:01) | |
| AB [auth DD] | e6mtcDD1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Metallophos | F: | ECOD (20:10:01) | |
| BB [auth EE] | e6mtcEE1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Metallophos | F: | ECOD (20:10:01) | |
| CB [auth FF] | e6mtcFF1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Metallophos | F: | ECOD (20:10:01) | |
| DB [auth GG] | e6mtcGG1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Metallophos | F: | ECOD (20:10:01) | |
| EB [auth HH] | e6mtcHH1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Metallophos | F: | ECOD (20:10:01) | |
| GB [auth JJ] | e6mtcJJ1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Metallophos | F: | ECOD (20:10:01) | |
| HB [auth KK] | e6mtcKK1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Metallophos | F: | ECOD (20:10:01) | |
| IB [auth LL] | e6mtcLL1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Metallophos | F: | ECOD (20:10:01) | |
| JB [auth MM] | e6mtcMM1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Metallophos | F: | ECOD (20:10:01) | |
| KB [auth NN] | e6mtcNN1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Metallophos | F: | ECOD (20:10:01) | |
| LB [auth OO] | e6mtcOO1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Metallophos | F: | ECOD (20:10:01) | |
| OB [auth RR] | e6mtcRR1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Metallophos | F: | ECOD (20:10:01) | |
| PB [auth SS] | e6mtcSS1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Metallophos | F: | ECOD (20:10:01) | |
| QB [auth TT] | e6mtcTT1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Metallophos | F: | ECOD (20:10:01) | |
| RB [auth UU] | e6mtcUU1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Metallophos | F: | ECOD (20:10:01) | |
| SB [auth VV] | e6mtcVV1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Metallophos | F: | ECOD (20:10:01) | |
| TB [auth WW] | e6mtcWW1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Metallophos | F: | ECOD (20:10:01) | |
| UB [auth XX] | e6mtcXX1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Metallophos | F: | ECOD (20:10:01) | |
| VB [auth YY] | e6mtcYY1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Metallophos | F: | ECOD (20:10:01) | |
| WB [auth ZZ] | e6mtcZZ1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Metallophos | F: | ECOD (20:10:01) | |
| XB [auth aa] | e6mtcaa1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Metallophos | F: | ECOD (20:10:01) | |
| YB [auth bb] | e6mtcbb1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Metallophos | F: | ECOD (20:10:01) | |
| ZB [auth cc] | e6mtccc1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Metallophos | F: | ECOD (20:10:01) | |
| AC [auth dd] | e6mtcdd1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Metallophos | F: | ECOD (20:10:01) | |
| CC [auth ff] | e6mtcff1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Metallophos | F: | ECOD (20:10:01) | |
| DC [auth gg] | e6mtcgg1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Metallophos | F: | ECOD (20:10:01) | |
| BC [auth ee] | e6mtcee1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Metallophos | F: | ECOD (20:10:01) | |
| NB [auth QQ] | e6mtcQQ1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Metallophos | F: | ECOD (20:10:01) | |
| MB [auth PP] | e6mtcPP1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Metallophos | F: | ECOD (20:10:01) | |
| FB [auth II] | e6mtcII1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Metallophos | F: | ECOD (20:10:01) | |
| YA [auth BB] | e6mtcBB1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Metallophos | F: | ECOD (20:10:01) | |
| XA [auth AA] | e6mtcAA1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Metallophos | F: | ECOD (20:10:01) | |
| SA [auth p] | e6mtcp1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Ribosomal_L1 | F: | ECOD (20:10:01) | |
| RA [auth o] | e6mtco1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Ribosomal_L1 | F: | ECOD (20:10:01) | |
| HA [auth e] | e6mtce1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Ribosomal_L1 | F: | ECOD (20:10:01) | |
| W [auth T] | e6mtcT1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Ribosomal_L1 | F: | ECOD (20:10:01) | |
| N [auth J] | e6mtcJ1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Ribosomal_L1 | F: | ECOD (20:10:01) | |
| M [auth I] | e6mtcI1 | A: L-aspartase middle domain-like | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: Ribosomal_L1 | F: | ECOD (20:10:01) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| E [auth A] | PF03947 | Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C) | Ribosomal Proteins L2, C-terminal domain | Domain | |
| E [auth A] | PF00181 | Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N) | Ribosomal Proteins L2, RNA binding N-terminal domain | Domain | |
| E [auth A] | PF00828 | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A) | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A | This family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. | Domain |
| F [auth B] | PF00297 | Ribosomal protein L3 (Ribosomal_L3) | Ribosomal protein L3 | - | Family |
| G [auth C] | PF14374 | 60S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C) | 60S ribosomal protein L4 C-terminal domain | This family is found at the very C-terminal of 60 ribosomal L4 proteins. | Domain |
| G [auth C] | PF00573 | Ribosomal protein L4/L1 family (Ribosomal_L4) | Ribosomal protein L4/L1 family | - | Family |
| G [auth C] | PF01248 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae) | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family | This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ... | Domain |
| H [auth D] | PF17144 | Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e) | Ribosomal large subunit proteins 60S L5, and 50S L18 | - | Family |
| H [auth D] | PF01198 | Ribosomal protein L31e (Ribosomal_L31e) | Ribosomal protein L31e | - | Family |
| H [auth D] | PF14204 | Ribosomal L18 C-terminal region (Ribosomal_L18_c) | Ribosomal L18 C-terminal region | This domain is the C-terminal end of ribosomal L18/L5 proteins. | Domain |
| I [auth E] | PF01655 | Ribosomal protein L32 (Ribosomal_L32e) | Ribosomal protein L32 | - | Family |
| I [auth E] | PF01159 | Ribosomal protein L6e (Ribosomal_L6e) | Ribosomal protein L6e | - | Family |
| J [auth F] | PF08079 | Ribosomal L30 N-terminal domain (Ribosomal_L30_N) | Ribosomal L30 N-terminal domain | This presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1]. | Domain |
| J [auth F] | PF00327 | Ribosomal protein L30p/L7e (Ribosomal_L30) | Ribosomal protein L30p/L7e | This family includes prokaryotic L30 and eukaryotic L7. | Domain |
| L [auth H] | PF00347 | Ribosomal protein L6 (Ribosomal_L6) | Ribosomal protein L6 | Domain | |
| L [auth H] | PF00831 | Ribosomal L29 protein (Ribosomal_L29) | Ribosomal L29 protein | - | Family |
| O [auth L] | PF00832 | Ribosomal L39 protein (Ribosomal_L39) | Ribosomal L39 protein | - | Family |
| P [auth M] | PF01929 | Ribosomal protein L14 (Ribosomal_L14e) | Ribosomal protein L14 | - | Family |
| Q [auth N] | PF00827 | Ribosomal L15 (Ribosomal_L15e) | Ribosomal L15 | - | Family |
| R [auth O] | PF00935 | Ribosomal protein L44 (Ribosomal_L44) | Ribosomal protein L44 | - | Family |
| S [auth P] | PF00237 | Ribosomal protein L22p/L17e (Ribosomal_L22) | Ribosomal protein L22p/L17e | This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. | Domain |
| S [auth P] | PF01780 | Ribosomal L37ae protein family (Ribosomal_L37ae) | Ribosomal L37ae protein family | - | Family |
| U [auth R] | PF01778 | Ribosomal L28e protein family (Ribosomal_L28e) | Ribosomal L28e protein family | - | Family |
| X [auth U] | PF00687 | Ribosomal protein L1p/L10e family (Ribosomal_L1) | Ribosomal protein L1p/L10e family | This family includes prokaryotic L1 and eukaryotic L10. | Domain |
| Y [auth V] | PF00238 | Ribosomal protein L14p/L23e (Ribosomal_L14) | Ribosomal protein L14p/L23e | Domain | |
| Z [auth W] | PF01246 | Ribosomal protein L24e (Ribosomal_L24e) | Ribosomal protein L24e | Domain | |
| BA [auth Y] | PF16906 | Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26) | Ribosomal proteins L26 eukaryotic, L24P archaeal | - | Family |
| BA [auth Y] | PF00467 | KOW motif (KOW) | KOW motif | - | Family |
| CA [auth Z] | PF01777 | Ribosomal L27e protein family (Ribosomal_L27e) | Ribosomal L27e protein family | - | Family |
| CA [auth Z] | PF00467 | KOW motif (KOW) | KOW motif | - | Family |
| AB [auth DD] | PF00253 | Ribosomal protein S14p/S29e (Ribosomal_S14) | Ribosomal protein S14p/S29e | - | Family |
| BB [auth EE] | PF04758 | Ribosomal protein S30 (Ribosomal_S30) | Ribosomal protein S30 | - | Family |
| CB [auth FF] | PF00177 | Ribosomal protein S7p/S5e (Ribosomal_S7) | Ribosomal protein S7p/S5e | This family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. | Domain |
| CB [auth FF] | PF01599 | Ribosomal protein S27a (Ribosomal_S27) | Ribosomal protein S27a | This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ... | Domain |
| DB [auth GG] | PF01092 | Ribosomal protein S6e (Ribosomal_S6e) | Ribosomal protein S6e | - | Family |
| DB [auth GG] | PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat |
| EB [auth HH] | PF01251 | Ribosomal protein S7e (Ribosomal_S7e) | Ribosomal protein S7e | - | Family |
| GB [auth JJ] | PF00163 | Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4) | Ribosomal protein S4/S9 N-terminal domain | - | Family |
| GB [auth JJ] | PF01479 | S4 domain (S4) | S4 domain | The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ... | Domain |
| HB [auth KK] | PF03501 | Plectin/S10 domain (S10_plectin) | Plectin/S10 domain | This presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding. | Domain |
| IB [auth LL] | PF00366 | Ribosomal protein S17 (Ribosomal_S17) | Ribosomal protein S17 | Domain | |
| IB [auth LL] | PF16205 | Ribosomal_S17 N-terminal (Ribosomal_S17_N) | Ribosomal_S17 N-terminal | - | Family |
| JB [auth MM] | PF01248 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae) | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family | This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ... | Domain |
| KB [auth NN] | PF08069 | Ribosomal S13/S15 N-terminal domain (Ribosomal_S13_N) | Ribosomal S13/S15 N-terminal domain | This domain is found at the N-terminus of ribosomal S13 and S15 proteins. This domain is also identified as NUC021 [1]. | Domain |
| KB [auth NN] | PF00312 | Ribosomal protein S15 (Ribosomal_S15) | Ribosomal protein S15 | Domain | |
| OB [auth RR] | PF00833 | Ribosomal S17 (Ribosomal_S17e) | Ribosomal S17 | - | Family |
| PB [auth SS] | PF00416 | Ribosomal protein S13/S18 (Ribosomal_S13) | Ribosomal protein S13/S18 | - | Family |
| TB [auth WW] | PF00410 | Ribosomal protein S8 (Ribosomal_S8) | Ribosomal protein S8 | Domain | |
| WB [auth ZZ] | PF03297 | S25 ribosomal protein (Ribosomal_S25) | S25 ribosomal protein | - | Family |
| MB [auth PP] | PF00203 | Ribosomal protein S19 (Ribosomal_S19) | Ribosomal protein S19 | Domain | |
| YA [auth BB] | PF01015 | Ribosomal S3Ae family (Ribosomal_S3Ae) | Ribosomal S3Ae family | - | Family |
| W [auth T] | PF01157 | Ribosomal protein L21e (Ribosomal_L21e) | Ribosomal protein L21e | - | Family |
| N [auth J] | PF00281 | Ribosomal protein L5 (Ribosomal_L5) | Ribosomal protein L5 | Domain | |
| N [auth J] | PF00673 | ribosomal L5P family C-terminus (Ribosomal_L5_C) | ribosomal L5P family C-terminus | This region is found associated with Pfam:PF00281. | Domain |
| M [auth I] | PF00252 | Ribosomal protein L16p/L10e (Ribosomal_L16) | Ribosomal protein L16p/L10e | Domain | |
| M [auth I] | PF01158 | Ribosomal protein L36e (Ribosomal_L36e) | Ribosomal protein L36e | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Protein Modification Annotation
| Modified Residue(s) | ||
|---|---|---|
| Chain | Residue(s) | Description |
| B [auth 5] | 1MA | Parent Component: A |
| B [auth 5] | 2MG | Parent Component: G |
| B [auth 5] | 5MC | Parent Component: C |
| B [auth 5] | 5MU | Parent Component: U |
| B [auth 5] | 6MZ | Parent Component: A |
| B [auth 5] | 7MG | Parent Component: G |
| B [auth 5] | A2M | Parent Component: A |
| B [auth 5] | B8H | Parent Component: U |
| B [auth 5] | B8K | Parent Component: G |
| B [auth 5] | B8Q | Parent Component: C |
| B [auth 5] | B8T | Parent Component: C |
| B [auth 5] | B8W | Parent Component: G |
| B [auth 5] | B9B | Parent Component: G |
| B [auth 5] | B9H | Parent Component: C |
| B [auth 5] | BGH | Parent Component: G |
| B [auth 5] | E6G | Parent Component: G |
| B [auth 5] | E7G | Parent Component: G |
| B [auth 5] | I4U | Parent Component: U |
| B [auth 5] | M7A | Parent Component: A |
| B [auth 5] | MHG | Parent Component: G |
| B [auth 5] | OMC | Parent Component: C |
| B [auth 5] | OMG | Parent Component: G |
| B [auth 5] | OMU | Parent Component: U |
| B [auth 5] | P4U | Parent Component: U |
| B [auth 5] | P7G | Parent Component: G |
| B [auth 5] | PSU | Parent Component: U |
| B [auth 5] | UR3 | Parent Component: U |
| D [auth 8] | OMU | Parent Component: U |
| G [auth C] | MLZ | Parent Component: LYS :  AA0076 :  N6-methyl-L-lysine MOD:00085 |
| PA [auth m] | MLZ | Parent Component: LYS :  AA0076 , AA0076 :  N6-methyl-L-lysine MOD:00085 , N6-methyl-L-lysine MOD:00085 |
| WA [auth 9] | 4AC | Parent Component: C :  AA0076 , AA0076 |
| WA [auth 9] | 5MC | Parent Component: C :  AA0076 , AA0076 |
| WA [auth 9] | 5MU | Parent Component: U :  AA0076 , AA0076 |
| WA [auth 9] | 6MZ | Parent Component: A :  AA0076 , AA0076 |
| WA [auth 9] | A2M | Parent Component: A :  AA0076 , AA0076 |
| WA [auth 9] | B8N | :  AA0076 , AA0076 |
| WA [auth 9] | B8Q | Parent Component: C |
| WA [auth 9] | E3C | Parent Component: C |
| WA [auth 9] | M7A | Parent Component: A :  AA0076 , AA0076 |
| WA [auth 9] | MA6 | Parent Component: A :  AA0076 , AA0076 |
| WA [auth 9] | OMC | Parent Component: C :  AA0076 , AA0076 |
| WA [auth 9] | OMG | Parent Component: G :  AA0076 , AA0076 |
| WA [auth 9] | OMU | Parent Component: U :  AA0076 , AA0076 |
| WA [auth 9] | PSU | Parent Component: U :  AA0076 , AA0076 |
| WA [auth 9] | UR3 | Parent Component: U :  AA0076 , AA0076 |














