6OS0
Structure of synthetic nanobody-stabilized angiotensin II type 1 receptor bound to angiotensin II
External Resource: Annotation
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- SAbDab Antibody Annotation
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Pharos: Disease Associations
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
- Membrane Protein Annotation: mpstruc
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | 7tm_1_1,Cytochrom_B562_1 | e6os0A2 | A: alpha bundles | X: Family A G protein-coupled receptor-like (From Topology) | H: Family A G protein-coupled receptor-like (From Topology) | T: Family A G protein-coupled receptor-like | F: 7tm_1_1,Cytochrom_B562_1 | ECOD (1.6) |
A | 7tm_1_1 | e6os0A1 | A: alpha bundles | X: Four-helical up-and-down bundle | H: Cytochromes (From Topology) | T: Cytochromes | F: 7tm_1_1 | ECOD (1.6) |
B [auth D] | V-set_8 | e6os0D1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_8 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.120.10 | Mainly Alpha | Up-down Bundle | Four Helix Bundle (Hemerythrin (Met), subunit A) | Cytochrome c/b562 | CATH (utative) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
B [auth D] | Heavy Chain | IGHV1 | - | type-1 angiotensin ii receptor,soluble cytochrome b562 brilfusion protein | SAbDab (2025-02-28) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF07361 | Cytochrome b562 (Cytochrom_B562) | Cytochrome b562 | - | Family | |
PF00001 | 7 transmembrane receptor (rhodopsin family) (7tm_1) | 7 transmembrane receptor (rhodopsin family) | This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GC ... | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000190 | Angiotensin II receptor type 1 | Family | |
IPR000276 | G protein-coupled receptor, rhodopsin-like | Family | |
IPR017452 | GPCR, rhodopsin-like, 7TM | Domain | |
IPR050119 | C-C chemokine receptor type 1-9-like | Family | |
IPR000248 | Angiotensin II receptor family | Family | |
IPR010980 | Cytochrome c/b562 | Homologous Superfamily | |
IPR009155 | Cytochrome b562 | Family | |
C [auth B] | IPR000215 | Serpin family | Family |
C [auth B] | IPR042178 | Serpin superfamily, domain 1 | Homologous Superfamily |
C [auth B] | IPR023795 | Serpin, conserved site | Conserved Site |
C [auth B] | IPR033834 | Angiotensinogen, serpin domain | Domain |
C [auth B] | IPR036186 | Serpin superfamily | Homologous Superfamily |
C [auth B] | IPR000227 | Angiotensinogen | Family |
C [auth B] | IPR023796 | Serpin domain | Domain |
C [auth B] | IPR042185 | Serpin superfamily, domain 2 | Homologous Superfamily |
Pharos: Disease Associations Pharos Homepage Annotation
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | Rhodopsin-like receptors and pumps | G-protein coupled receptors, family A |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | G Protein-Coupled Receptors: Class A | Angiotensin II type 1 receptor with bound angiotensin II |