6P3H | pdb_00006p3h

Crystal structure of LigU(K66M) bound to substrate

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad6p3ha1 Alpha and beta proteins (a+b) Diaminopimelate epimerase-like Diaminopimelate epimerase-like automated matches automated matches (Novosphingobium sp. KA1 ) [TaxId: 164608 ], SCOPe (2.08)
Ad6p3ha3 Artifacts Tags Tags Tags C-terminal Tags (Novosphingobium sp. KA1 ) [TaxId: 164608 ], SCOPe (2.08)
B [auth D]d6p3hd1 Alpha and beta proteins (a+b) Diaminopimelate epimerase-like Diaminopimelate epimerase-like automated matches automated matches (Novosphingobium sp. KA1 ) [TaxId: 164608 ], SCOPe (2.08)
B [auth D]d6p3hd3 Artifacts Tags Tags Tags C-terminal Tags (Novosphingobium sp. KA1 ) [TaxId: 164608 ], SCOPe (2.08)
Cd6p3hc1 Alpha and beta proteins (a+b) Diaminopimelate epimerase-like Diaminopimelate epimerase-like automated matches automated matches (Novosphingobium sp. KA1 ) [TaxId: 164608 ], SCOPe (2.08)
Cd6p3hc3 Artifacts Tags Tags Tags C-terminal Tags (Novosphingobium sp. KA1 ) [TaxId: 164608 ], SCOPe (2.08)
D [auth B]d6p3hb1 Alpha and beta proteins (a+b) Diaminopimelate epimerase-like Diaminopimelate epimerase-like automated matches automated matches (Novosphingobium sp. KA1 ) [TaxId: 164608 ], SCOPe (2.08)
D [auth B]d6p3hb3 Artifacts Tags Tags Tags C-terminal Tags (Novosphingobium sp. KA1 ) [TaxId: 164608 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AYcf9e6p3hA1 A: alpha bundlesX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF: Ycf9ECOD (develop294)
B [auth D]Ycf9e6p3hD1 A: alpha bundlesX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF: Ycf9ECOD (develop294)
CYcf9e6p3hC1 A: alpha bundlesX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF: Ycf9ECOD (develop294)
D [auth B]Ycf9e6p3hB1 A: alpha bundlesX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF: Ycf9ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.10.310.10 Alpha Beta Roll Diaminopimelate Epimerase Chain A, domain 1CATH (utative)
B [auth D]3.10.310.10 Alpha Beta Roll Diaminopimelate Epimerase Chain A, domain 1CATH (utative)
C3.10.310.10 Alpha Beta Roll Diaminopimelate Epimerase Chain A, domain 1CATH (utative)
D [auth B]3.10.310.10 Alpha Beta Roll Diaminopimelate Epimerase Chain A, domain 1CATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
B [auth D],
C,
D [auth B]		(4E)-oxalomesaconate Delta-isomerase -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
B [auth D],
C,
D [auth B]		IPR007400PrpF-likeFamily
A,
B [auth D],
C,
D [auth B]		IPR0476874-oxalomesaconate tautomerase-likeFamily