High resolution cryo-EM structure of E.coli 50S
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| C [auth K] | SCOP2B Superfamily | Translation proteins SH3-like KOW motif containing domain | 8035393 | 3000334 | SCOP2B (2022-06-29) |
| C [auth K] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8035394 | 3000135 | SCOP2B (2022-06-29) |
| D [auth L] | SCOP2B Superfamily | Translational proteins | 8032955 | 3000811 | SCOP2B (2022-06-29) |
| E [auth M] | SCOP2B Superfamily | Ribosomal protein L4 | 8096356 | 3001146 | SCOP2B (2022-06-29) |
| H [auth P] | SCOP2B Superfamily | Ribosomal protein L9 C-domain | 8032958 | 3000329 | SCOP2B (2022-06-29) |
| H [auth P] | SCOP2B Superfamily | L9 N-domain-like | 8032960 | 3000338 | SCOP2B (2022-06-29) |
| I [auth Q] | SCOP2B Superfamily | Ribosomal protein L11, C-terminal domain | 8032961 | 3001186 | SCOP2B (2022-06-29) |
| I [auth Q] | SCOP2B Superfamily | Ribosomal L11/L12e N-terminal domain-like | 8032963 | 3000950 | SCOP2B (2022-06-29) |
| J [auth R] | SCOP2B Superfamily | Ribosomal protein L13 | 8096350 | 3001134 | SCOP2B (2022-06-29) |
| L [auth T] | SCOP2B Superfamily | Ribosomal proteins L15p and L18e | 8070553 | 3001045 | SCOP2B (2022-06-29) |
| M [auth U] | SCOP2 Family | Ribosomal protein L16p | 8097605 | 4003717 | SCOP2 (2022-06-29) |
| M [auth U] | SCOP2 Superfamily | Ribosomal protein L16p/L10e | 8097606 | 3000884 | SCOP2 (2022-06-29) |
| M [auth U] | SCOP2B Superfamily | Ribosomal protein L16p/L10e | 8096366 | 3000884 | SCOP2B (2022-06-29) |
| Q [auth Y] | SCOP2 Family | Ribosomal protein L20 | 8100905 | 4001930 | SCOP2 (2022-06-29) |
| Q [auth Y] | SCOP2 Superfamily | Ribosomal protein L20 | 8100906 | 3000563 | SCOP2 (2022-06-29) |
| Q [auth Y] | SCOP2B Superfamily | Ribosomal protein L20 | 8096382 | 3000563 | SCOP2B (2022-06-29) |
| S [auth a] | SCOP2B Superfamily | Ribosomal protein L22 | 8096336 | 3001078 | SCOP2B (2022-06-29) |
| T [auth b] | SCOP2 Family | L23p | 8093577 | 4000943 | SCOP2 (2022-06-29) |
| T [auth b] | SCOP2 Superfamily | Ribosomal proteins S24e, L23 and L15e | 8093578 | 3000210 | SCOP2 (2022-06-29) |
| T [auth b] | SCOP2B Superfamily | Ribosomal proteins S24e, L23 and L15e | 8035415 | 3000210 | SCOP2B (2022-06-29) |
| W [auth e] | SCOP2 Family | Ribosomal L27 protein | 8093423 | 4001900 | SCOP2 (2022-06-29) |
| W [auth e] | SCOP2 Superfamily | Ribosomal L27 protein-like | 8093424 | 3000539 | SCOP2 (2022-06-29) |
| W [auth e] | SCOP2B Superfamily | Ribosomal L27 protein-like | 8096338 | 3000539 | SCOP2B (2022-06-29) |
| X [auth f] | SCOP2B Superfamily | L28p-like | 8035424 | 3001966 | SCOP2B (2022-06-29) |
| Y [auth g] | SCOP2B Superfamily | Ribosomal protein L29 (L29p) | 8096370 | 3000713 | SCOP2B (2022-06-29) |
| BA [auth j] | SCOP2 Family | Ribosomal protein L33p | 8093457 | 4000511 | SCOP2 (2022-06-29) |
| BA [auth j] | SCOP2 Superfamily | Zn-binding ribosomal proteins | 8093458 | 3001320 | SCOP2 (2022-06-29) |
| BA [auth j] | SCOP2B Superfamily | Zn-binding ribosomal proteins | 8096362 | 3001320 | SCOP2B (2022-06-29) |
| DA [auth l] | SCOP2 Family | Ribosomal protein L35p | 8093589 | 4003406 | SCOP2 (2022-06-29) |
| DA [auth l] | SCOP2 Superfamily | L35p-like | 8093590 | 3000790 | SCOP2 (2022-06-29) |
| DA [auth l] | SCOP2B Superfamily | L35p-like | 8035388 | 3000790 | SCOP2B (2022-06-29) |
| G [auth O] | SCOP2B Superfamily | Ribosomal protein L6 | 8035397 | 3000724 | SCOP2B (2022-06-29) |
| G [auth O] | SCOP2B Superfamily | Ribosomal protein L6 | 8035398 | 3000724 | SCOP2B (2022-06-29) |
| F [auth N] | SCOP2 Family | Ribosomal protein L5 | 8097879 | 4001498 | SCOP2 (2022-06-29) |
| F [auth N] | SCOP2 Superfamily | RL5-like | 8097880 | 3001709 | SCOP2 (2022-06-29) |
| F [auth N] | SCOP2B Superfamily | RL5-like | 8096352 | 3001709 | SCOP2B (2022-06-29) |
| EA [auth m] | SCOP2B Superfamily | Ribosomal protein L36 | 8035391 | 3001346 | SCOP2B (2022-06-29) |
| AA [auth i] | SCOP2 Family | Ribosomal protein L32p | 8093691 | 4000508 | SCOP2 (2022-06-29) |
| AA [auth i] | SCOP2 Superfamily | Zn-binding ribosomal proteins | 8093692 | 3001320 | SCOP2 (2022-06-29) |
| AA [auth i] | SCOP2B Superfamily | Zn-binding ribosomal proteins | 8096380 | 3001320 | SCOP2B (2022-06-29) |
| Z [auth h] | SCOP2 Family | Ribosomal protein L30p/L7e | 8098027 | 4001360 | SCOP2 (2022-06-29) |
| Z [auth h] | SCOP2 Superfamily | Ribosomal protein L30p/L7e | 8098028 | 3001378 | SCOP2 (2022-06-29) |
| Z [auth h] | SCOP2B Superfamily | Ribosomal protein L30p/L7e | 8096372 | 3001378 | SCOP2B (2022-06-29) |
| V [auth d] | SCOP2B Superfamily | Ribosomal protein L25-like | 8042538 | 3001161 | SCOP2B (2022-06-29) |
| U [auth c] | SCOP2 Family | Ribosomal proteins L24p and L21e | 8100851 | 4001752 | SCOP2 (2022-06-29) |
| U [auth c] | SCOP2 Superfamily | Translation proteins SH3-like KOW motif containing domain | 8100852 | 3000334 | SCOP2 (2022-06-29) |
| U [auth c] | SCOP2B Superfamily | Translation proteins SH3-like KOW motif containing domain | 8096358 | 3000334 | SCOP2B (2022-06-29) |
| R [auth Z] | SCOP2B Superfamily | l21p-like | 8096354 | 3002005 | SCOP2B (2022-06-29) |
| P [auth X] | SCOP2 Family | Ribosomal protein L19 | 8093579 | 4001761 | SCOP2 (2022-06-29) |
| P [auth X] | SCOP2 Superfamily | Translation proteins SH3-like KOW motif containing domain | 8093580 | 3000334 | SCOP2 (2022-06-29) |
| P [auth X] | SCOP2B Superfamily | Translation proteins SH3-like KOW motif containing domain | 8096364 | 3000334 | SCOP2B (2022-06-29) |
| O [auth W] | SCOP2B Superfamily | Translational machinery components | 8032969 | 3000571 | SCOP2B (2022-06-29) |
| N [auth V] | SCOP2B Superfamily | Prokaryotic ribosomal protein L17 | 8035409 | 3000995 | SCOP2B (2022-06-29) |
| K [auth S] | SCOP2 Family | Ribosomal protein L14 | 8097617 | 4001826 | SCOP2 (2022-06-29) |
| K [auth S] | SCOP2 Superfamily | 50S Ribosomal protein L14-like | 8097618 | 3000433 | SCOP2 (2022-06-29) |
| K [auth S] | SCOP2B Superfamily | 50S Ribosomal protein L14-like | 8103358 | 3000433 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C [auth K] | Flu_NP | e6pj6K1 | A: alpha bundles | X: P-loop domains-like | H: Helical bundle in flu nucleocapsid protein | T: Helical bundle in flu nucleocapsid protein | F: Flu_NP | ECOD (develop294) |
| D [auth L] | Flu_NP | e6pj6L1 | A: alpha bundles | X: P-loop domains-like | H: Helical bundle in flu nucleocapsid protein | T: Helical bundle in flu nucleocapsid protein | F: Flu_NP | ECOD (develop294) |
| E [auth M] | Ald_deCOase | e6pj6M1 | A: alpha bundles | X: Rubredoxin-like | H: Ferritin/Heme oxygenase | T: Heme oxygenase/Ribonucleotide reductase | F: Ald_deCOase | ECOD (develop294) |
| H [auth P] | Flu_NP | e6pj6P1 | A: alpha bundles | X: P-loop domains-like | H: Helical bundle in flu nucleocapsid protein | T: Helical bundle in flu nucleocapsid protein | F: Flu_NP | ECOD (develop294) |
| I [auth Q] | Flu_NP | e6pj6Q1 | A: alpha bundles | X: P-loop domains-like | H: Helical bundle in flu nucleocapsid protein | T: Helical bundle in flu nucleocapsid protein | F: Flu_NP | ECOD (develop294) |
| J [auth R] | Flu_NP | e6pj6R1 | A: alpha bundles | X: P-loop domains-like | H: Helical bundle in flu nucleocapsid protein | T: Helical bundle in flu nucleocapsid protein | F: Flu_NP | ECOD (develop294) |
| L [auth T] | Flu_NP | e6pj6T1 | A: alpha bundles | X: P-loop domains-like | H: Helical bundle in flu nucleocapsid protein | T: Helical bundle in flu nucleocapsid protein | F: Flu_NP | ECOD (develop294) |
| M [auth U] | Flu_NP | e6pj6U1 | A: alpha bundles | X: P-loop domains-like | H: Helical bundle in flu nucleocapsid protein | T: Helical bundle in flu nucleocapsid protein | F: Flu_NP | ECOD (develop294) |
| Q [auth Y] | Flu_NP | e6pj6Y1 | A: alpha bundles | X: P-loop domains-like | H: Helical bundle in flu nucleocapsid protein | T: Helical bundle in flu nucleocapsid protein | F: Flu_NP | ECOD (develop294) |
| S [auth a] | Flu_NP | e6pj6a1 | A: alpha bundles | X: P-loop domains-like | H: Helical bundle in flu nucleocapsid protein | T: Helical bundle in flu nucleocapsid protein | F: Flu_NP | ECOD (develop294) |
| T [auth b] | Flu_NP | e6pj6b1 | A: alpha bundles | X: P-loop domains-like | H: Helical bundle in flu nucleocapsid protein | T: Helical bundle in flu nucleocapsid protein | F: Flu_NP | ECOD (develop294) |
| W [auth e] | Flu_NP | e6pj6e1 | A: alpha bundles | X: P-loop domains-like | H: Helical bundle in flu nucleocapsid protein | T: Helical bundle in flu nucleocapsid protein | F: Flu_NP | ECOD (develop294) |
| X [auth f] | Flu_NP | e6pj6f1 | A: alpha bundles | X: P-loop domains-like | H: Helical bundle in flu nucleocapsid protein | T: Helical bundle in flu nucleocapsid protein | F: Flu_NP | ECOD (develop294) |
| Y [auth g] | Flu_NP | e6pj6g1 | A: alpha bundles | X: P-loop domains-like | H: Helical bundle in flu nucleocapsid protein | T: Helical bundle in flu nucleocapsid protein | F: Flu_NP | ECOD (develop294) |
| BA [auth j] | Flu_NP | e6pj6j1 | A: alpha bundles | X: P-loop domains-like | H: Helical bundle in flu nucleocapsid protein | T: Helical bundle in flu nucleocapsid protein | F: Flu_NP | ECOD (develop294) |
| DA [auth l] | Flu_NP | e6pj6l1 | A: alpha bundles | X: P-loop domains-like | H: Helical bundle in flu nucleocapsid protein | T: Helical bundle in flu nucleocapsid protein | F: Flu_NP | ECOD (develop294) |
| G [auth O] | Flu_NP | e6pj6O1 | A: alpha bundles | X: P-loop domains-like | H: Helical bundle in flu nucleocapsid protein | T: Helical bundle in flu nucleocapsid protein | F: Flu_NP | ECOD (develop294) |
| F [auth N] | Flu_NP | e6pj6N1 | A: alpha bundles | X: P-loop domains-like | H: Helical bundle in flu nucleocapsid protein | T: Helical bundle in flu nucleocapsid protein | F: Flu_NP | ECOD (develop294) |
| EA [auth m] | Flu_NP | e6pj6m1 | A: alpha bundles | X: P-loop domains-like | H: Helical bundle in flu nucleocapsid protein | T: Helical bundle in flu nucleocapsid protein | F: Flu_NP | ECOD (develop294) |
| CA [auth k] | Flu_NP | e6pj6k1 | A: alpha bundles | X: P-loop domains-like | H: Helical bundle in flu nucleocapsid protein | T: Helical bundle in flu nucleocapsid protein | F: Flu_NP | ECOD (develop294) |
| AA [auth i] | Flu_NP | e6pj6i1 | A: alpha bundles | X: P-loop domains-like | H: Helical bundle in flu nucleocapsid protein | T: Helical bundle in flu nucleocapsid protein | F: Flu_NP | ECOD (develop294) |
| Z [auth h] | Flu_NP | e6pj6h1 | A: alpha bundles | X: P-loop domains-like | H: Helical bundle in flu nucleocapsid protein | T: Helical bundle in flu nucleocapsid protein | F: Flu_NP | ECOD (develop294) |
| V [auth d] | Flu_NP | e6pj6d1 | A: alpha bundles | X: P-loop domains-like | H: Helical bundle in flu nucleocapsid protein | T: Helical bundle in flu nucleocapsid protein | F: Flu_NP | ECOD (develop294) |
| U [auth c] | Flu_NP | e6pj6c1 | A: alpha bundles | X: P-loop domains-like | H: Helical bundle in flu nucleocapsid protein | T: Helical bundle in flu nucleocapsid protein | F: Flu_NP | ECOD (develop294) |
| R [auth Z] | Flu_NP | e6pj6Z1 | A: alpha bundles | X: P-loop domains-like | H: Helical bundle in flu nucleocapsid protein | T: Helical bundle in flu nucleocapsid protein | F: Flu_NP | ECOD (develop294) |
| P [auth X] | Flu_NP | e6pj6X1 | A: alpha bundles | X: P-loop domains-like | H: Helical bundle in flu nucleocapsid protein | T: Helical bundle in flu nucleocapsid protein | F: Flu_NP | ECOD (develop294) |
| O [auth W] | Flu_NP | e6pj6W1 | A: alpha bundles | X: P-loop domains-like | H: Helical bundle in flu nucleocapsid protein | T: Helical bundle in flu nucleocapsid protein | F: Flu_NP | ECOD (develop294) |
| N [auth V] | Flu_NP | e6pj6V1 | A: alpha bundles | X: P-loop domains-like | H: Helical bundle in flu nucleocapsid protein | T: Helical bundle in flu nucleocapsid protein | F: Flu_NP | ECOD (develop294) |
| K [auth S] | Flu_NP | e6pj6S1 | A: alpha bundles | X: P-loop domains-like | H: Helical bundle in flu nucleocapsid protein | T: Helical bundle in flu nucleocapsid protein | F: Flu_NP | ECOD (develop294) |














