6RJK
Structure of virulence factor SghA from Agrobacterium tumefaciens
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d6rjka_ | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | (Trans)glycosidases | automated matches | automated matches | (Agrobacterium tumefaciens A6 ) [TaxId: 1453998 ], | SCOPe (2.08) |
B | d6rjkb_ | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | (Trans)glycosidases | automated matches | automated matches | (Agrobacterium tumefaciens A6 ) [TaxId: 1453998 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Glyco_hydro_1 | e6rjkA1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Glyco_hydro_1 | ECOD (1.6) |
B | Glyco_hydro_1 | e6rjkB1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Glyco_hydro_1 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00232 | Glycosyl hydrolase family 1 (Glyco_hydro_1) | Glycosyl hydrolase family 1 | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001360 | Glycoside hydrolase family 1 | Family | |
IPR018120 | Glycoside hydrolase family 1, active site | Active Site | |
IPR017853 | Glycoside hydrolase superfamily | Homologous Superfamily | |
IPR033132 | Glycosyl hydrolases family 1, N-terminal conserved site | Conserved Site | |
IPR017736 | Glycoside hydrolase, family 1, beta-glucosidase | Family |