6SYN
Crystal structure of Y. pestis penicillin-binding protein 3
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d6syna1 | Alpha and beta proteins (a+b) | Penicillin binding protein dimerisation domain | Penicillin binding protein dimerisation domain | automated matches | automated matches | (Yersinia pestis ) [TaxId: 632 ], | SCOPe (2.08) |
A | d6syna2 | Multi-domain proteins (alpha and beta) | beta-lactamase/transpeptidase-like | beta-lactamase/transpeptidase-like | automated matches | automated matches | (Yersinia pestis ) [TaxId: 632 ], | SCOPe (2.08) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00905 | Penicillin binding protein transpeptidase domain (Transpeptidase) | Penicillin binding protein transpeptidase domain | The active site serine (residue 337 in Swiss:P14677) is conserved in all members of this family. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR012338 | Beta-lactamase/transpeptidase-like | Homologous Superfamily | |
IPR050515 | Bacterial Transpeptidases and Beta-Lactamases | Family | |
IPR036138 | Penicillin-binding protein, dimerisation domain superfamily | Homologous Superfamily | |
IPR037532 | Peptidoglycan D,D-transpeptidase FtsI | Family | |
IPR005311 | Penicillin-binding protein, dimerisation domain | Domain | |
IPR001460 | Penicillin-binding protein, transpeptidase | Domain |