6SZB | pdb_00006szb

MoxR AAA-ATPase RavA, spiral open ring conformation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth D]Chlor_dismutasee6szbD1 A: alpha bundlesX: Family A G protein-coupled receptor-likeH: beta-sandwich domain in metalloprotease stcET: beta-sandwich domain in metalloprotease stcEF: Chlor_dismutaseECOD (develop294)
B [auth C]Chlor_dismutasee6szbC1 A: alpha bundlesX: Family A G protein-coupled receptor-likeH: beta-sandwich domain in metalloprotease stcET: beta-sandwich domain in metalloprotease stcEF: Chlor_dismutaseECOD (develop294)
D [auth A]Chlor_dismutasee6szbA1 A: alpha bundlesX: Family A G protein-coupled receptor-likeH: beta-sandwich domain in metalloprotease stcET: beta-sandwich domain in metalloprotease stcEF: Chlor_dismutaseECOD (develop294)
F [auth E]Chlor_dismutasee6szbE1 A: alpha bundlesX: Family A G protein-coupled receptor-likeH: beta-sandwich domain in metalloprotease stcET: beta-sandwich domain in metalloprotease stcEF: Chlor_dismutaseECOD (develop294)
E [auth F]Chlor_dismutasee6szbF1 A: alpha bundlesX: Family A G protein-coupled receptor-likeH: beta-sandwich domain in metalloprotease stcET: beta-sandwich domain in metalloprotease stcEF: Chlor_dismutaseECOD (develop294)
C [auth B]Chlor_dismutasee6szbB1 A: alpha bundlesX: Family A G protein-coupled receptor-likeH: beta-sandwich domain in metalloprotease stcET: beta-sandwich domain in metalloprotease stcEF: Chlor_dismutaseECOD (develop294)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF20265ATPase, RavA, LARA domain (LARA_dom)ATPase, RavA, LARA domainThis is the LARA (LdcI Associating domain of RavA) domain of bacterial regulatory ATPase RavA (Regulatory ATPase variant A) [1,2]. It adopts an unique fold which consists of a compact antiparallel beta-barrel- like structure formed by six beta-strand ...This is the LARA (LdcI Associating domain of RavA) domain of bacterial regulatory ATPase RavA (Regulatory ATPase variant A) [1,2]. It adopts an unique fold which consists of a compact antiparallel beta-barrel- like structure formed by six beta-strands and one alpha-helix [1,2]. This domain mediates the interaction between RavA and LdcI (inducible lysine decarboxylase) which form a cage-like complex proposed to assist assembly of specific respiratory complexes in E. coli [2].
Domain
PF07728AAA domain (dynein-related subfamily) (AAA_5)AAA domain (dynein-related subfamily)This Pfam entry includes some of the AAA proteins not detected by the Pfam:PF00004 model. Domain
PF12592ATPase, RavA, C-terminal (ATPase_RavA_C)ATPase, RavA, C-terminalThis domain is found at the C-terminal of bacterial regulatory ATPase RavA (Regulatory ATPase variant A) [1,2] and is the second subdomain that forms the discontinuous triple helical domain [1]. RavA forms an hexamer in which the triple helical domai ...This domain is found at the C-terminal of bacterial regulatory ATPase RavA (Regulatory ATPase variant A) [1,2] and is the second subdomain that forms the discontinuous triple helical domain [1]. RavA forms an hexamer in which the triple helical domain mediates the lateral interactions between neighbouring RavA monomers [2].
Domain
PF17868AAA lid domain (AAA_lid_8)AAA lid domainThis entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR045427MoxR domainDomain
IPR050513RavA family ATPasesFamily
IPR046898ATPase RavA, LARA domainDomain
IPR046932ATPase RavA, LARA domain superfamilyHomologous Superfamily
IPR023671ATPase RavAFamily
IPR003593AAA+ ATPase domainDomain
IPR022547ATPase, RavA, C-terminalDomain
IPR041538ATPase RavA-like, AAA lid domainDomain
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily