Crystal structure of wild type EndoBT-3987 from Bacteroides thetaiotamicron VPI-5482
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | Cas_Csm6_6H | e6t8iA1 | A: alpha bundles | X: Family A G protein-coupled receptor-like | H: Sodium/proton antiporter subunits-like | T: NADH-quinone oxidoreductase subunit 8 (Nqo8)-related | F: Cas_Csm6_6H | ECOD (develop294) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 2.60.40.1740 | Mainly Beta | Sandwich | Immunoglobulin-like | hypothetical protein (bacova_03559) | CATH (utative) |
| A | 3.20.20.80 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycosidases | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF08522 | BT_3987-like, N-terminal domain (BT_3987-like_N) | BT_3987-like, N-terminal domain | This domain, previously known as DUF1735, is found in a number of proteins mainly found in firmicutes, including BT_3987 from Bacteroides thetaiotaomicron, which displays hydrolytic activity against Hy-type N-glycans, probably initiating the degradat ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Endo-beta-N-acetylglucosaminidase F1 | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR013728 | BT_3987-like, N-terminal domain | Domain | |
| IPR017853 | Glycoside hydrolase superfamily | Homologous Superfamily |














