Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
E [auth H]SCOP2B SuperfamilyTrkA C-terminal domain-like 8057608 3000037 SCOP2B (2022-06-29)
E [auth H]SCOP2B SuperfamilyPotassium channel/Rex NAD-binding domain-like 8057606 3000042 SCOP2B (2022-06-29)
G [auth F]SCOP2B SuperfamilyPotassium channel/Rex NAD-binding domain-like 8057606 3000042 SCOP2B (2022-06-29)
G [auth F]SCOP2B SuperfamilyTrkA C-terminal domain-like 8057608 3000037 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyPotassium channel/Rex NAD-binding domain-like 8057606 3000042 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyVoltage-gated potassium channels 8001548 3000023 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyTrkA C-terminal domain-like 8057608 3000037 SCOP2B (2022-06-29)
B [auth C]SCOP2B SuperfamilyVoltage-gated potassium channels 8001548 3000023 SCOP2B (2022-06-29)
B [auth C]SCOP2B SuperfamilyPotassium channel/Rex NAD-binding domain-like 8057606 3000042 SCOP2B (2022-06-29)
B [auth C]SCOP2B SuperfamilyTrkA C-terminal domain-like 8057608 3000037 SCOP2B (2022-06-29)
C [auth B]SCOP2B SuperfamilyVoltage-gated potassium channels 8001548 3000023 SCOP2B (2022-06-29)
C [auth B]SCOP2B SuperfamilyPotassium channel/Rex NAD-binding domain-like 8057606 3000042 SCOP2B (2022-06-29)
C [auth B]SCOP2B SuperfamilyTrkA C-terminal domain-like 8057608 3000037 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyPotassium channel/Rex NAD-binding domain-like 8057606 3000042 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyTrkA C-terminal domain-like 8057608 3000037 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyVoltage-gated potassium channels 8001548 3000023 SCOP2B (2022-06-29)
F [auth G]SCOP2B SuperfamilyTrkA C-terminal domain-like 8057608 3000037 SCOP2B (2022-06-29)
F [auth G]SCOP2B SuperfamilyPotassium channel/Rex NAD-binding domain-like 8057606 3000042 SCOP2B (2022-06-29)
H [auth E]SCOP2B SuperfamilyPotassium channel/Rex NAD-binding domain-like 8057606 3000042 SCOP2B (2022-06-29)
H [auth E]SCOP2B SuperfamilyTrkA C-terminal domain-like 8057608 3000037 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
E [auth H]TrkA_Ce6u6hH1 A: a+b two layersX: TrkA C-terminal domain-like (From Topology)H: TrkA C-terminal domain-like (From Topology)T: TrkA C-terminal domain-likeF: TrkA_CECOD (1.6)
E [auth H]TrkA_Ne6u6hH2 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: NAD(P)-binding Rossmann-fold domainsF: TrkA_NECOD (1.6)
G [auth F]TrkA_Ce6u6hF1 A: a+b two layersX: TrkA C-terminal domain-like (From Topology)H: TrkA C-terminal domain-like (From Topology)T: TrkA C-terminal domain-likeF: TrkA_CECOD (1.6)
G [auth F]TrkA_Ne6u6hF2 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: NAD(P)-binding Rossmann-fold domainsF: TrkA_NECOD (1.6)
AIon_trans_2e6u6hA1 A: alpha complex topologyX: Voltage-gated ion channels (From Topology)H: Voltage-gated ion channels (From Topology)T: Voltage-gated ion channelsF: Ion_trans_2ECOD (1.6)
ATrkA_Ce6u6hA2 A: a+b two layersX: TrkA C-terminal domain-like (From Topology)H: TrkA C-terminal domain-like (From Topology)T: TrkA C-terminal domain-likeF: TrkA_CECOD (1.6)
ATrkA_Ne6u6hA3 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: NAD(P)-binding Rossmann-fold domainsF: TrkA_NECOD (1.6)
B [auth C]Ion_trans_2e6u6hC2 A: alpha complex topologyX: Voltage-gated ion channels (From Topology)H: Voltage-gated ion channels (From Topology)T: Voltage-gated ion channelsF: Ion_trans_2ECOD (1.6)
B [auth C]TrkA_Ce6u6hC3 A: a+b two layersX: TrkA C-terminal domain-like (From Topology)H: TrkA C-terminal domain-like (From Topology)T: TrkA C-terminal domain-likeF: TrkA_CECOD (1.6)
B [auth C]TrkA_Ne6u6hC1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: NAD(P)-binding Rossmann-fold domainsF: TrkA_NECOD (1.6)
C [auth B]Ion_trans_2e6u6hB2 A: alpha complex topologyX: Voltage-gated ion channels (From Topology)H: Voltage-gated ion channels (From Topology)T: Voltage-gated ion channelsF: Ion_trans_2ECOD (1.6)
C [auth B]TrkA_Ce6u6hB3 A: a+b two layersX: TrkA C-terminal domain-like (From Topology)H: TrkA C-terminal domain-like (From Topology)T: TrkA C-terminal domain-likeF: TrkA_CECOD (1.6)
C [auth B]TrkA_Ne6u6hB1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: NAD(P)-binding Rossmann-fold domainsF: TrkA_NECOD (1.6)
DIon_trans_2e6u6hD1 A: alpha complex topologyX: Voltage-gated ion channels (From Topology)H: Voltage-gated ion channels (From Topology)T: Voltage-gated ion channelsF: Ion_trans_2ECOD (1.6)
DTrkA_Ce6u6hD2 A: a+b two layersX: TrkA C-terminal domain-like (From Topology)H: TrkA C-terminal domain-like (From Topology)T: TrkA C-terminal domain-likeF: TrkA_CECOD (1.6)
DTrkA_Ne6u6hD3 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: NAD(P)-binding Rossmann-fold domainsF: TrkA_NECOD (1.6)
F [auth G]TrkA_Ce6u6hG2 A: a+b two layersX: TrkA C-terminal domain-like (From Topology)H: TrkA C-terminal domain-like (From Topology)T: TrkA C-terminal domain-likeF: TrkA_CECOD (1.6)
F [auth G]TrkA_Ne6u6hG1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: NAD(P)-binding Rossmann-fold domainsF: TrkA_NECOD (1.6)
H [auth E]TrkA_Ce6u6hE2 A: a+b two layersX: TrkA C-terminal domain-like (From Topology)H: TrkA C-terminal domain-like (From Topology)T: TrkA C-terminal domain-likeF: TrkA_CECOD (1.6)
H [auth E]TrkA_Ne6u6hE1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: NAD(P)-binding Rossmann-fold domainsF: TrkA_NECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF02080TrkA-C domain (TrkA_C)TrkA-C domainThis domain is often found next to the Pfam:PF02254 domain. The exact function of this domain is unknown. It has been suggested that it may bind an unidentified ligand [1]. The domain is predicted to adopt an all beta structure [1].Domain
PF02254TrkA-N domain (TrkA_N)TrkA-N domainThis domain is found in a wide variety of proteins. These protein include potassium channels Swiss:P31069, phosphoesterases Swiss:Q59027, and various other transporters. This domain binds to NAD.Domain
PF07885Ion channel (Ion_trans_2)Ion channel- Family