Crystal structure of LasR-Aqs1 complex from Pseudomonas aeruginosa
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A [auth B] | e6v7wB1 | A: alpha bundles | X: cradle loop barrel | H: N-terminal domain of poxin | T: N-terminal domain of poxin | F: | ECOD (develop294) | |
| D [auth E] | e6v7wE1 | A: alpha bundles | X: cradle loop barrel | H: N-terminal domain of poxin | T: N-terminal domain of poxin | F: | ECOD (develop294) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A [auth B] | 3.30.450.80 | Alpha Beta | 2-Layer Sandwich | Beta-Lactamase | Transcription factor LuxR-like, autoinducer-binding domain | CATH (utative) |
| A [auth B] | 1.10.10.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | CATH (utative) |
| D [auth E] | 3.30.450.80 | Alpha Beta | 2-Layer Sandwich | Beta-Lactamase | Transcription factor LuxR-like, autoinducer-binding domain | CATH (utative) |
| D [auth E] | 1.10.10.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| A [auth B], D [auth E] | PF03472 | Autoinducer binding domain (Autoind_bind) | Autoinducer binding domain | This domain is found a a large family of transcriptional regulators. This domain specifically binds to autoinducer molecules (N-Acyl homoserine lactones, chlorolactone and rosmarinic acid) (Matilla et. al., FEMS Microbiology Reviews, fuab043, 45, 20 ... | Domain |
| A [auth B], D [auth E] | PF00196 | Bacterial regulatory proteins, luxR family (GerE) | Bacterial regulatory proteins, luxR family | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| A [auth B], D [auth E] | IPR000792 | Transcription regulator LuxR, C-terminal | Domain |
| A [auth B], D [auth E] | IPR036693 | Transcription factor LuxR-like, autoinducer-binding domain superfamily | Homologous Superfamily |
| A [auth B], D [auth E] | IPR016032 | Signal transduction response regulator, C-terminal effector | Homologous Superfamily |
| A [auth B], D [auth E] | IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily |
| A [auth B], D [auth E] | IPR005143 | Transcription factor LuxR-like, autoinducer-binding domain | Domain |














