6VLW | pdb_00006vlw

Crystal Structure of 426cOD in Complex with VRC01 Fab


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
C [auth G]e6vlwG1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT:F:ECOD (20:10:01)
B [auth L]e6vlwL1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT:F:ECOD (20:10:01)
A [auth H]e6vlwH1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT:F:ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B [auth L]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
B [auth L]Fab VRC01, anti-gp120 CD4-binding site (CD4bs) [HIV-1], broadly L-KAPPA Homo sapiens (human) IGKV3-20*01, IGKJ1*01, IGKC*01 V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA IG FAB-GAMMA-1_KAPPA IMGT (202609-0)
A [auth H]Fab VRC01, anti-gp120 CD4-binding site (CD4bs) [HIV-1], broadly H-GAMMA-1 Homo sapiens (human) IGHV1-18*01, IGHV1-18*04, IGHJ3*01, IGHJ3*02, IGHJ6*01, IGHJ6*04, IGHG1*03, IGHG1*08, IGHG1*06 V-DOMAIN VH, C-DOMAIN CH1 IG FAB-GAMMA-1_KAPPA IMGT (202609-0)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
B [auth L]Light ChainIGKV3 Kappa426codSAbDab (2026-03-13)

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A [auth H]PCA Parent Component: GLN

RESIDAA0031

PSI-MOD :  2-pyrrolidone-5-carboxylic acid (Gln) MOD:00040 , 2-pyrrolidone-5-carboxylic acid (Glu) MOD:00420