6Y4H | pdb_00006y4h

Solution structure of cold-shock domain 7 and 8 of drosophila Upstream of N-Ras (Unr)

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	CSD	e6y4hA1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: CSD	ECOD (v294.1)
A	WD40, Beta-prop_WDR3_2nd	e6y4hA2	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: WD40, Beta-prop_WDR3_2nd	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.40.50.140	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	Nucleic acid-binding proteins	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00313	'Cold-shock' DNA-binding domain (CSD)	'Cold-shock' DNA-binding domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Upstream of N-ras, isoform A	RNA binding binding lncRNA binding nucleic acid binding RISC complex binding ribonucleoprotein complex binding protein-containing complex binding mRNA 3'-UTR binding mRNA binding translation regulator activity mRNA regulatory element binding translation repressor activity translation repressor activity protein-RNA adaptor activity protein-macromolecule adaptor activity RNA binding binding lncRNA binding nucleic acid binding RISC complex binding ribonucleoprotein complex binding protein-containing complex binding mRNA 3'-UTR binding mRNA binding translation regulator activity mRNA regulatory element binding translation repressor activity translation repressor activity protein-RNA adaptor activity protein-macromolecule adaptor activity molecular adaptor activity	regulation of cellular process cellular component organization cellular component biogenesis cellular component assembly chromatin organization protein-containing complex assembly chromatin remodeling cellular component organization or biogenesis regulation of biosynthetic process regulation of biological process protein-containing complex organization sex-chromosome dosage compensation epigenetic regulation of gene expression biological regulation regulation of cellular process cellular component organization cellular component biogenesis cellular component assembly chromatin organization protein-containing complex assembly chromatin remodeling cellular component organization or biogenesis regulation of biosynthetic process regulation of biological process protein-containing complex organization sex-chromosome dosage compensation epigenetic regulation of gene expression biological regulation regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process regulation of gene expression dosage compensation complex assembly biosynthetic process cellular process regulation of macromolecule biosynthetic process metabolic process macromolecule metabolic process regulation of metabolic process developmental process cellular developmental process cell differentiation reproductive process sex differentiation developmental process involved in reproduction negative regulation of biological process protein biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation negative regulation of cellular process translational initiation protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of translational initiation regulation of protein metabolic process negative regulation of metabolic process negative regulation of translational initiation primary metabolic process translation negative regulation of gene expression negative regulation of biosynthetic process regulation of translation negative regulation of macromolecule biosynthetic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR011129	Cold-shock domain	Domain
A	IPR056400	Cold shock domain-containing protein E1, CSD domain	Domain
A	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
A	IPR002059	Cold-shock protein Csp, DNA-binding	Domain
A	IPR019844	Cold-shock domain, conserved site	Conserved Site

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.