6YS8 | pdb_00006ys8

Structure of GldLM, the proton-powered motor that drives protein transport and gliding motility

External Resource: Annotation

Domain Annotation: ECOD Classification
InterPro: Protein Family Classification
Membrane Protein Annotation: OPM
Membrane Protein Annotation: PDBTM
Membrane Protein Annotation: MemProtMD
Membrane Protein Annotation: mpstruc

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PA14	e6ys8A1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: PA14	ECOD (develop294)
B	PA14	e6ys8B1	A: alpha bundles	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: PA14	ECOD (develop294)

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR048406	Gliding motility-associated protein GldM, second immunoglobulin-like domain	Domain
A, B	IPR022719	Gliding motility-associated protein GldM, C-terminal	Domain
A, B	IPR022720	Gliding motility-associated protein GldM, N-terminal	Domain
A, B	IPR019859	Gliding motility-associated protein GldM	Family
A, B	IPR048405	Gliding motility-associated protein GldM, first immunoglobulin-like domain	Domain
C [auth G], D [auth F], E, F [auth D], G [auth C]	IPR055087	Gliding motility protein GldL-like, N-terminal domain	Domain
C [auth G], D [auth F], E, F [auth D], G [auth C]	IPR019852	Gliding motility-associated protein, GldL	Family

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A, B, C [auth G], D [auth F], E A, B, C [auth G], D [auth F], E, F [auth D], G [auth C]	OPM	Transmembrane	Alpha-helical polytopic	Type 9 secretory system	Type 9 secretory system

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Chains	External Link	Comment
A, B, C [auth G], D [auth F], E A, B, C [auth G], D [auth F], E, F [auth D], G [auth C]	PDBTM	Annotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

Chains	External Link	Comment
A, B, C [auth G], D [auth F], E A, B, C [auth G], D [auth F], E, F [auth D], G [auth C]	MemProtMD	Annotated as membrane protein by MemProtMD

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
A, B, C [auth G], D [auth F], E A, B, C [auth G], D [auth F], E, F [auth D], G [auth C]	mpstruc	TRANSMEMBRANE PROTEINS: ALPHA-HELICAL	Type IX Secretion System Motors	GldLM proton-powered motor

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.