6YW6 | pdb_00006yw6

Cryo-EM structure of the ARP2/3 1B5CL isoform complex.


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
D [auth E]SCOP2B SuperfamilyArp2/3 complex 21 kDa subunit ARPC3 8093592 3001830 SCOP2B (2022-06-29)
G [auth F]SCOP2B SuperfamilyArp2/3 complex subunits 8093618 3000751 SCOP2B (2022-06-29)
F [auth G]SCOP2 FamilyArp2/3 complex 16 kDa subunit ARPC5 8100453 4002906 SCOP2 (2022-06-29)
F [auth G]SCOP2 SuperfamilyArp2/3 complex 16 kDa subunit ARPC5 8100454 3001882 SCOP2 (2022-06-29)
B [auth C]SCOP2B SuperfamilyWD40 repeat-like 8094325 3001694 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyActin-like ATPases 8094241 3000092 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyActin-like ATPases 8094242 3000092 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
D [auth E]CSDe6yw6E1 A: a/b three-layered sandwichesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: CSDECOD (v294.1)
G [auth F]CSDe6yw6F1 A: a/b three-layered sandwichesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: CSDECOD (v294.1)
F [auth G]CSDe6yw6G1 A: a/b three-layered sandwichesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: CSDECOD (v294.1)
E [auth B]CSDe6yw6B1 A: a/b three-layered sandwichesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: CSDECOD (v294.1)
C [auth D]CSDe6yw6D1 A: a/b three-layered sandwichesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: CSDECOD (v294.1)
B [auth C]CSDe6yw6C1 A: a/b three-layered sandwichesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: CSDECOD (v294.1)
ACSDe6yw6A1 A: a/b three-layered sandwichesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: CSDECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C [auth D]PF04045Arp2/3 complex, 34 kD subunit p34-Arc (P34-Arc)Arp2/3 complex, 34 kD subunit p34-Arc- Family
B [auth C]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
PF00022Actin (Actin)Actin- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
D [auth E]Actin-related protein 2/3 complex subunit 3
G [auth F]Actin-related protein 2/3 complex subunit 4
F [auth G]Actin-related protein 2/3 complex subunit 5-like protein
E [auth B]Actin-related protein 2
C [auth D]Actin-related protein 2/3 complex subunit 2
B [auth C]ARPC1B
Actin-related protein 3

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
D [auth E]PharosO15145
G [auth F]PharosP59998
F [auth G]PharosQ9BPX5
E [auth B]PharosP61160
C [auth D]PharosO15144
B [auth C]PharosO15143
PharosP61158