6Z6U | pdb_00006z6u

1.25 A structure of human apoferritin obtained from Titan Mono-BCOR microscope


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad6z6ua_ All alpha proteins Ferritin-like Ferritin-like Ferritin (Apo)ferritin Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
B [auth K]d6z6uk_ All alpha proteins Ferritin-like Ferritin-like Ferritin (Apo)ferritin Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
F [auth e]d6z6ue_ All alpha proteins Ferritin-like Ferritin-like Ferritin (Apo)ferritin Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
G [auth 1]d6z6u1_ All alpha proteins Ferritin-like Ferritin-like Ferritin (Apo)ferritin Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
I [auth G]d6z6ug_ All alpha proteins Ferritin-like Ferritin-like Ferritin (Apo)ferritin Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
J [auth I]d6z6ui_ All alpha proteins Ferritin-like Ferritin-like Ferritin (Apo)ferritin Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
K [auth M]d6z6um_ All alpha proteins Ferritin-like Ferritin-like Ferritin (Apo)ferritin Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
L [auth O]d6z6uo_ All alpha proteins Ferritin-like Ferritin-like Ferritin (Apo)ferritin Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
O [auth U]d6z6uu_ All alpha proteins Ferritin-like Ferritin-like Ferritin (Apo)ferritin Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
P [auth W]d6z6uw_ All alpha proteins Ferritin-like Ferritin-like Ferritin (Apo)ferritin Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Q [auth Y]d6z6uy_ All alpha proteins Ferritin-like Ferritin-like Ferritin (Apo)ferritin Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
R [auth 2]d6z6u2_ All alpha proteins Ferritin-like Ferritin-like Ferritin (Apo)ferritin Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
S [auth 4]d6z6u4_ All alpha proteins Ferritin-like Ferritin-like Ferritin (Apo)ferritin Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
T [auth F]d6z6uf_ All alpha proteins Ferritin-like Ferritin-like Ferritin (Apo)ferritin Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
V [auth P]d6z6up_ All alpha proteins Ferritin-like Ferritin-like Ferritin (Apo)ferritin Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
X [auth 6]d6z6u6_ All alpha proteins Ferritin-like Ferritin-like Ferritin (Apo)ferritin Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
W [auth X]d6z6ux_ All alpha proteins Ferritin-like Ferritin-like Ferritin (Apo)ferritin Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
U [auth H]d6z6uh_ All alpha proteins Ferritin-like Ferritin-like Ferritin (Apo)ferritin Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
N [auth S]d6z6us_ All alpha proteins Ferritin-like Ferritin-like Ferritin (Apo)ferritin Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
M [auth Q]d6z6uq_ All alpha proteins Ferritin-like Ferritin-like Ferritin (Apo)ferritin Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
H [auth r]d6z6ur_ All alpha proteins Ferritin-like Ferritin-like Ferritin (Apo)ferritin Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
D [auth B]d6z6ub_ All alpha proteins Ferritin-like Ferritin-like Ferritin (Apo)ferritin Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
B [auth K]SCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
C [auth a]SCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
F [auth e]SCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
G [auth 1]SCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
I [auth G]SCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
J [auth I]SCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
K [auth M]SCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
L [auth O]SCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
O [auth U]SCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
P [auth W]SCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
Q [auth Y]SCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
R [auth 2]SCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
S [auth 4]SCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
T [auth F]SCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
V [auth P]SCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
X [auth 6]SCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
W [auth X]SCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
U [auth H]SCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
N [auth S]SCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
M [auth Q]SCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
H [auth r]SCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
D [auth B]SCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AC1-sete6z6uA1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: C1-setECOD (develop294)
B [auth K]C1-sete6z6uK1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: C1-setECOD (develop294)
C [auth a]C1-sete6z6ua1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: C1-setECOD (develop294)
EC1-sete6z6uE1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: C1-setECOD (develop294)
F [auth e]C1-sete6z6ue1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: C1-setECOD (develop294)
G [auth 1]C1-sete6z6u11 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: C1-setECOD (develop294)
I [auth G]C1-sete6z6uG1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: C1-setECOD (develop294)
J [auth I]C1-sete6z6uI1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: C1-setECOD (develop294)
K [auth M]C1-sete6z6uM1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: C1-setECOD (develop294)
L [auth O]C1-sete6z6uO1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: C1-setECOD (develop294)
O [auth U]C1-sete6z6uU1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: C1-setECOD (develop294)
P [auth W]C1-sete6z6uW1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: C1-setECOD (develop294)
Q [auth Y]C1-sete6z6uY1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: C1-setECOD (develop294)
R [auth 2]C1-sete6z6u21 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: C1-setECOD (develop294)
S [auth 4]C1-sete6z6u41 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: C1-setECOD (develop294)
T [auth F]C1-sete6z6uF1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: C1-setECOD (develop294)
V [auth P]C1-sete6z6uP1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: C1-setECOD (develop294)
X [auth 6]C1-sete6z6u61 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: C1-setECOD (develop294)
W [auth X]C1-sete6z6uX1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: C1-setECOD (develop294)
U [auth H]C1-sete6z6uH1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: C1-setECOD (develop294)
N [auth S]C1-sete6z6uS1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: C1-setECOD (develop294)
M [auth Q]C1-sete6z6uQ1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: C1-setECOD (develop294)
H [auth r]C1-sete6z6ur1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: C1-setECOD (develop294)
D [auth B]C1-sete6z6uB1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: C1-setECOD (develop294)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00210Ferritin-like domain (Ferritin)Ferritin-like domainThis family contains ferritins and other ferritin-like proteins such as members of the DPS family and bacterioferritins. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Ferritin heavy chain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR009040Ferritin-like diiron domainDomain
IPR012347Ferritin-likeHomologous Superfamily
IPR009078Ferritin-like superfamilyHomologous Superfamily
IPR008331Ferritin/DPS domainDomain
IPR001519FerritinFamily
IPR014034Ferritin, conserved siteConserved Site

Protein Modification Annotation