Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
D [auth B]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8061280 3001397 SCOP2B (2022-06-29)
E [auth C]SCOP2B SuperfamilyRibosomal S3Ae-like 8053211 3002166 SCOP2B (2022-06-29)
H [auth F]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8052760 3000334 SCOP2B (2022-06-29)
H [auth F]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8052758 3001473 SCOP2B (2022-06-29)
H [auth F]SCOP2B SuperfamilyNucleic acid-binding proteins 8052759 3000135 SCOP2B (2022-06-29)
I [auth G]SCOP2B SuperfamilyRibosomal protein S7 8065993 3000799 SCOP2B (2022-06-29)
J [auth H]SCOP2B SuperfamilyGS N-terminal domain-like 8053173 3000408 SCOP2B (2022-06-29)
L [auth J]SCOP2B Superfamily50S Ribosomal protein L14-like 8053083 3000433 SCOP2B (2022-06-29)
N [auth L]SCOP2B SuperfamilyWinged helix DNA-binding domain 8055713 3000034 SCOP2B (2022-06-29)
O [auth M]SCOP2B SuperfamilyRibosomal S17 N-terminal domain-like 8052736 3002138 SCOP2B (2022-06-29)
O [auth M]SCOP2B SuperfamilyNucleic acid-binding proteins 8052738 3000135 SCOP2B (2022-06-29)
P [auth N]SCOP2B SuperfamilyL30e-like 8096946 3001739 SCOP2B (2022-06-29)
Q [auth O]SCOP2B SuperfamilyHomeodomain-like 8052973 3000001 SCOP2B (2022-06-29)
Q [auth O]SCOP2B SuperfamilyS15/NS1 RNA-binding domain 8052974 3001284 SCOP2B (2022-06-29)
R [auth P]SCOP2B SuperfamilyTranslational machinery components 8095805 3000571 SCOP2B (2022-06-29)
S [auth Q]SCOP2B SuperfamilyRibosomal protein S19 8086076 3000686 SCOP2B (2022-06-29)
T [auth R]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8103366 3000100 SCOP2B (2022-06-29)
V [auth T]SCOP2B SuperfamilyS13-like H2TH domain 8098450 3000053 SCOP2B (2022-06-29)
X [auth V]SCOP2B SuperfamilyRibosomal protein S10 8098648 3001336 SCOP2B (2022-06-29)
Y [auth W]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8053136 3000068 SCOP2B (2022-06-29)
Z [auth X]SCOP2B SuperfamilyRibosomal protein S8 8096922 3000709 SCOP2B (2022-06-29)
CA [auth a]SCOP2B SuperfamilyWinged helix DNA-binding domain 8059235 3000034 SCOP2B (2022-06-29)
DA [auth b]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8093614 3000068 SCOP2B (2022-06-29)
FA [auth d]SCOP2B SuperfamilyNucleic acid-binding proteins 8063424 3000135 SCOP2B (2022-06-29)
GA [auth e]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052569 3000068 SCOP2B (2022-06-29)
HA [auth f]SCOP2B SuperfamilyRibosomal protein S30e-like 8053451 3002190 SCOP2B (2022-06-29)
LA [auth p]SCOP2B SuperfamilyRNA-binding domain, RBD 8067322 3000110 SCOP2B (2022-06-29)
MA [auth q]SCOP2B SuperfamilyWinged helix DNA-binding domain 8093050 3000034 SCOP2B (2022-06-29)
MA [auth q]SCOP2B SuperfamilyTPR-like 8093043 3001345 SCOP2B (2022-06-29)
OA [auth m]SCOP2B SuperfamilyeIF1-like 8080979 3001441 SCOP2B (2022-06-29)
RA [auth k]SCOP2B SuperfamilyABC transporter-like P-loop ATPases 8089770 3002020 SCOP2B (2022-06-29)
RA [auth k]SCOP2B SuperfamilyABC transporter-like P-loop ATPases 8089771 3002020 SCOP2B (2022-06-29)
RA [auth k]SCOP2B Superfamily4Fe-4S ferredoxins 8089767 3000020 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth l]ANAPC4_WD40_1e6zcel1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: ANAPC4_WD40_1ECOD (1.6)
D [auth B]Ribosomal_S2_2e6zceB1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2_2ECOD (1.6)
E [auth C]Ribosomal_S3Ae_Ne6zceC2 A: beta barrelsX: Ribosomal protein L25-likeH: 40S ribosomal protein S3A N-terminal domain (From Topology)T: 40S ribosomal protein S3A N-terminal domainF: Ribosomal_S3Ae_NECOD (1.6)
E [auth C]Ribosomal_S3Ae_Ce6zceC1 A: a+b two layersX: T-foldH: 40S ribosomal protein S3A C-terminal domain (From Topology)T: 40S ribosomal protein S3A C-terminal domainF: Ribosomal_S3Ae_CECOD (1.6)
F [auth D]Ribosomal_S5_C_1e6zceD2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_C_1ECOD (1.6)
F [auth D]Ribosomal_S5_3e6zceD1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5_3ECOD (1.6)
F [auth D]Ribosomal_S5_2e6zceD3 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: Ribosomal_S5_2ECOD (1.6)
G [auth E]Ribosomal_S3_Ce6zceE1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
G [auth E]KH_2_3e6zceE2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_3ECOD (1.6)
H [auth F]Ribosomal_S4ee6zceF1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S4eECOD (1.6)
H [auth F]40S_S4_Ce6zceF3 A: beta barrelsX: SH3H: SH3T: SH3F: 40S_S4_CECOD (1.6)
H [auth F]RS4NTe6zceF2 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: RS4NTECOD (1.6)
I [auth G]Ribosomal_S7_1e6zceG1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
J [auth H]Ribosomal_S6ee6zceH1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_S6eECOD (1.6)
K [auth I]Ribosomal_S7e_Ne6zceI2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_NECOD (1.6)
K [auth I]Ribosomal_S7e_C_2e6zceI1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_C_2ECOD (1.6)
L [auth J]Ribosomal_S8ee6zceJ1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_S8eECOD (1.6)
M [auth K]S4e6zceK1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
N [auth L]S10_plectine6zceL1 A: alpha arraysX: HTHH: HTHT: wingedF: S10_plectinECOD (1.6)
O [auth M]Ribosomal_S17_1e6zceM1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
P [auth N]Ribosomal_L7Aee6zceN1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7AeECOD (1.6)
Q [auth O]Ribosomal_S13_Ne6zceO2 A: alpha arraysX: HTHH: 40S ribosomal protein S13 N-terminal domain (From Topology)T: 40S ribosomal protein S13 N-terminal domainF: Ribosomal_S13_NECOD (1.6)
Q [auth O]Ribosomal_S15_2e6zceO1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_2ECOD (1.6)
R [auth P]Ribosomal_S11e6zceP1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
S [auth Q]Ribosomal_S19e6zceQ1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
T [auth R]Ribosomal_S9e6zceR1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
U [auth S]Ribosomal_S17ee6zceS1 A: alpha arraysX: HTHH: HTHT: FF domainF: Ribosomal_S17eECOD (1.6)
V [auth T]Ribosomal_S13e6zceT1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13ECOD (1.6)
W [auth U]Ribosomal_S19ee6zceU1 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S19eECOD (1.6)
X [auth V]Ribosomal_S10_1e6zceV1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10_1ECOD (1.6)
Y [auth W]Ribosomal_S21ee6zceW1 A: a+b two layersX: 40S ribosomal protein rpS21 (S21e) (From Topology)H: 40S ribosomal protein rpS21 (S21e) (From Topology)T: 40S ribosomal protein rpS21 (S21e)F: Ribosomal_S21eECOD (1.6)
Z [auth X]Ribosomal_S8_N_1e6zceX1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_N_1ECOD (1.6)
Z [auth X]Ribosomal_S8_C_1e6zceX2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_C_1ECOD (1.6)
AA [auth Y]Ribosom_S12_S23e6zceY1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
BA [auth Z]Ribosomal_S24ee6zceZ1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_S24eECOD (1.6)
CA [auth a]Ribosomal_S25e6zcea1 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S25ECOD (1.6)
DA [auth b]Ribosomal_S26ee6zceb1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S26eECOD (1.6)
EA [auth c]Ribosomal_S27ee6zcec1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27eECOD (1.6)
FA [auth d]Ribosomal_S28ee6zced1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S28eECOD (1.6)
GA [auth e]Ribosomal_S14_2e6zcee1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14_2ECOD (1.6)
HA [auth f]Ribosomal_S30e6zcef1 A: extended segmentsX: 40S ribosomal protein S30 (S30e) (From Topology)H: 40S ribosomal protein S30 (S30e) (From Topology)T: 40S ribosomal protein S30 (S30e)F: Ribosomal_S30ECOD (1.6)
IA [auth g]Ribosomal_S27e6zceg1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27ECOD (1.6)
JA [auth h]ANAPC4_WD40_2e6zceh1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: ANAPC4_WD40_2ECOD (1.6)
NA [auth i]eIF-1ae6zcei1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: eIF-1aECOD (1.6)
OA [auth m]SUI1e6zcem1 A: a+b two layersX: Glucose permease domain IIB-likeH: eIF1-like (From Topology)T: eIF1-likeF: SUI1ECOD (1.6)
PA [auth t]eIF3_subunite6zcet1 A: alpha arraysX: Eukaryotic translation initiation factor 3 subunit 1 (From Topology)H: Eukaryotic translation initiation factor 3 subunit 1 (From Topology)T: Eukaryotic translation initiation factor 3 subunit 1F: eIF3_subunitECOD (1.6)
SA [auth s]F_UNCLASSIFIEDe6zces1 A: alpha arraysX: Eukaryotic translation initiation factor 3 subunit 1 (From Topology)H: Eukaryotic translation initiation factor 3 subunit 1 (From Topology)T: Eukaryotic translation initiation factor 3 subunit 1F: F_UNCLASSIFIEDECOD (1.6)
RA [auth k]RLIe6zcek3 A: a+b two layersX: 4Fe-4S ferredoxin (From Topology)H: 4Fe-4S ferredoxin (From Topology)T: 4Fe-4S ferredoxinF: RLIECOD (1.6)
RA [auth k]ABC_trane6zcek2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: ABC_tranECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
D [auth B]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
E [auth C]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
F [auth D]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domainDomain
F [auth D]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domainDomain
G [auth E]PF07650KH domain (KH_2)KH domainDomain
G [auth E]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
G [auth E]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. Domain
H [auth F]PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
H [auth F]PF1612140S ribosomal protein S4 C-terminus (40S_S4_C)40S ribosomal protein S4 C-terminus- Family
H [auth F]PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1]. Domain
H [auth F]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...Domain
H [auth F]PF00467KOW motif (KOW)KOW motif- Family
I [auth G]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. Domain
I [auth G]PF01599Ribosomal protein S27a (Ribosomal_S27)Ribosomal protein S27aThis family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...Domain
J [auth H]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
J [auth H]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
K [auth I]PF01251Ribosomal protein S7e (Ribosomal_S7e)Ribosomal protein S7e- Family
K [auth I]PF01176Translation initiation factor 1A / IF-1 (eIF-1a)Translation initiation factor 1A / IF-1This family includes both the eukaryotic translation factor eIF-1A and the bacterial translation initiation factor IF-1. Domain
L [auth J]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
M [auth K]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
M [auth K]PF04068Possible Fer4-like domain in RNase L inhibitor, RLI (Fer4_RLI)Possible Fer4-like domain in RNase L inhibitor, RLI- Family
M [auth K]PF000374Fe-4S binding domain (Fer4)4Fe-4S binding domainSuperfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain
M [auth K]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...Domain
M [auth K]PF00005ABC transporter (ABC_tran)ABC transporterABC transporters for a large family of proteins responsible for translocation of a variety of compounds across biological membranes. ABC transporters are the largest family of proteins in many completely sequenced bacteria. ABC transporters are comp ...Domain
N [auth L]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
N [auth L]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding. Domain
O [auth M]PF01253Translation initiation factor SUI1 (SUI1)Translation initiation factor SUI1Domain
O [auth M]PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
O [auth M]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17Domain
P [auth N]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...Domain
Q [auth O]PF22591eIF3a, PCI domain, TPR-like region (eIF3a_PCI_TPR-like)eIF3a, PCI domain, TPR-like region- Repeat
Q [auth O]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15Domain
R [auth P]PF00076RNA recognition motif (RRM_1)RNA recognition motifThe RRM motif (a.k.a. RRM, RBD, or RNP domain) is probably diagnostic of an RNA binding protein. RRMs are found in a variety of RNA binding proteins, including various hnRNP proteins, proteins implicated in regulation of alternative splicing, and pro ...Domain
R [auth P]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
S [auth Q]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19Domain
T [auth R]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
V [auth T]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
W [auth U]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
X [auth V]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain
Y [auth W]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family
Z [auth X]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8Domain
AA [auth Y]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. Domain
BA [auth Z]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth l]Eukaryotic translation initiation factor 3 subunit I
B [auth r]Eukaryotic translation initiation factor 3 subunit G
C [auth A]18S ribosomal RNA (1719-MER)---
D [auth B]40S ribosomal protein S0-A
E [auth C]40S ribosomal protein S1-A
F [auth D]40S ribosomal protein S2
G [auth E]40S ribosomal protein S3
H [auth F]40S ribosomal protein S4-A
I [auth G]40S ribosomal protein S5
J [auth H]40S ribosomal protein S6-A
K [auth I]40S ribosomal protein S7-A
L [auth J]40S ribosomal protein S8-A
M [auth K]40S ribosomal protein S9-A
N [auth L]40S ribosomal protein S10-A
O [auth M]40S ribosomal protein S11-A
P [auth N]40S ribosomal protein S12
Q [auth O]40S ribosomal protein S13
R [auth P]40S ribosomal protein S14-A
S [auth Q]40S ribosomal protein S15
T [auth R]40S ribosomal protein S16-A
U [auth S]40S ribosomal protein S17-A
V [auth T]40S ribosomal protein S18-A
W [auth U]40S ribosomal protein S19-A
X [auth V]40S ribosomal protein S20
Y [auth W]40S ribosomal protein S21-A
Z [auth X]40S ribosomal protein S22-A
AA [auth Y]40S ribosomal protein S23-A
BA [auth Z]40S ribosomal protein S24-A
CA [auth a]40S ribosomal protein S25-A
DA [auth b]40S ribosomal protein S26-A
EA [auth c]40S ribosomal protein S27-A
FA [auth d]40S ribosomal protein S28-B
GA [auth e]40S ribosomal protein S29-A
HA [auth f]40S ribosomal protein S30-A
IA [auth g]Ubiquitin-40S ribosomal protein S31
JA [auth h]Guanine nucleotide-binding protein subunit beta-like protein
KA [auth o]Eukaryotic translation initiation factor 3 subunit A
LA [auth p]Eukaryotic translation initiation factor 3 subunit B
MA [auth q]Eukaryotic translation initiation factor 3 subunit C
NA [auth i]Eukaryotic translation initiation factor 1A
OA [auth m]Eukaryotic translation initiation factor eIF-1
PA [auth t],
SA [auth s]
Eukaryotic translation initiation factor 3 subunit J
QA [auth j]RNA recognition motif (unknown)---
RA [auth k]Translation initiation factor RLI1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth l]IPR027525Eukaryotic translation initiation factor 3 subunit IFamily
A [auth l]IPR019775WD40 repeat, conserved siteConserved Site
A [auth l]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
A [auth l]IPR001680WD40 repeatRepeat
A [auth l]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
B [auth r]IPR000504RNA recognition motif domainDomain
B [auth r]IPR034240eIF3G, RNA recognition motifDomain
B [auth r]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
B [auth r]IPR024675Eukaryotic translation initiation factor 3 subunit G, N-terminalDomain
B [auth r]IPR035979RNA-binding domain superfamilyHomologous Superfamily
B [auth r]IPR017334Eukaryotic translation initiation factor 3 subunit GFamily
D [auth B]IPR005707Small ribosomal subunit protein uS2, eukaryotic/archaealFamily
D [auth B]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
D [auth B]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
D [auth B]IPR001865Small ribosomal subunit protein uS2Family
D [auth B]IPR027498Small ribosomal subunit protein uS2, eukaryoticFamily
E [auth C]IPR001593Small ribosomal subunit protein eS1Family
E [auth C]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
E [auth C]IPR027500Small ribosomal subunit protein eS1, eukaryotesFamily
F [auth D]IPR000851Small ribosomal subunit protein uS5Family
F [auth D]IPR005711Small ribosomal subunit protein uS5, eukaryotic/archaealFamily
F [auth D]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
F [auth D]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
F [auth D]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
F [auth D]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
F [auth D]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
G [auth E]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
G [auth E]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
G [auth E]IPR004044K Homology domain, type 2Domain
G [auth E]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
G [auth E]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
G [auth E]IPR005703Small ribosomal subunit protein uS3, eukaryotic/archaealFamily
G [auth E]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
H [auth F]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
H [auth F]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
H [auth F]IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
H [auth F]IPR002942RNA-binding S4 domainDomain
H [auth F]IPR013845Small ribosomal subunit protein eS4, central regionDomain
H [auth F]IPR000876Small ribosomal subunit protein eS4Family
H [auth F]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
H [auth F]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
H [auth F]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
H [auth F]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
H [auth F]IPR005824KOWDomain
I [auth G]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
I [auth G]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
I [auth G]IPR000235Small ribosomal subunit protein uS7Family
I [auth G]IPR023798Small ribosomal subunit protein uS7 domainDomain
I [auth G]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
J [auth H]IPR014401Small ribosomal subunit protein eS6-likeFamily
J [auth H]IPR001377Small ribosomal subunit protein eS6Family
J [auth H]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
K [auth I]IPR000554Small ribosomal subunit protein eS7Family
K [auth I]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
L [auth J]IPR001047Small ribosomal subunit protein eS8Family
L [auth J]IPR042563Small ribosomal subunit protein eS8 subdomain, eukaryotesHomologous Superfamily
L [auth J]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
L [auth J]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
M [auth K]IPR002942RNA-binding S4 domainDomain
M [auth K]IPR022801Small ribosomal subunit protein uS4Family
M [auth K]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
M [auth K]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
M [auth K]IPR005710Small ribosomal subunit protein uS4, eukaryotic/archaealFamily
M [auth K]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
N [auth L]IPR037447Small ribosomal subunit protein eS10Family
N [auth L]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
N [auth L]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
N [auth L]IPR005326Plectin/eS10, N-terminalDomain
O [auth M]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
O [auth M]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
O [auth M]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
O [auth M]IPR000266Small ribosomal subunit protein uS17Family
O [auth M]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
P [auth N]IPR000530Small ribosomal subunit protein eS12Family
P [auth N]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
P [auth N]IPR047860Small ribosomal subunit protein eS12, conserved siteConserved Site
P [auth N]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
Q [auth O]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
Q [auth O]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
Q [auth O]IPR000589Small ribosomal subunit protein uS15Family
Q [auth O]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotesFamily
R [auth P]IPR001971Small ribosomal subunit protein uS11Family
R [auth P]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
R [auth P]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
S [auth Q]IPR002222Small ribosomal subunit protein uS19Family
S [auth Q]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
S [auth Q]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
S [auth Q]IPR005713Small ribosomal subunit protein uS19, eukaryotic/archaealFamily
T [auth R]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
T [auth R]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
T [auth R]IPR000754Small ribosomal subunit protein uS9Family
T [auth R]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
U [auth S]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
U [auth S]IPR001210Small ribosomal subunit protein eS17Family
U [auth S]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
V [auth T]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
V [auth T]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
V [auth T]IPR001892Small ribosomal subunit protein uS13Family
V [auth T]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
W [auth U]IPR001266Small ribosomal subunit protein eS19Family
W [auth U]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
W [auth U]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
W [auth U]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
X [auth V]IPR001848Small ribosomal subunit protein uS10Family
X [auth V]IPR027486Small ribosomal subunit protein uS10 domainDomain
X [auth V]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
X [auth V]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
X [auth V]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
Y [auth W]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
Y [auth W]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
Y [auth W]IPR001931Small ribosomal subunit protein eS21Family
Z [auth X]IPR000630Small ribosomal subunit protein uS8Family
Z [auth X]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
Z [auth X]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
AA [auth Y]IPR006032Small ribosomal subunit protein uS12Family
AA [auth Y]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
AA [auth Y]IPR005680Small ribosomal subunit protein uS12, eukaryotic/archaealFamily
BA [auth Z]IPR053709Eukaryotic Ribosomal Protein eS24Homologous Superfamily
BA [auth Z]IPR001976Small ribosomal subunit protein eS24Family
BA [auth Z]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
BA [auth Z]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
CA [auth a]IPR004977Small ribosomal subunit protein eS25Family
CA [auth a]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
DA [auth b]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
DA [auth b]IPR000892Small ribosomal subunit protein eS26Family
DA [auth b]IPR047864Ribosomal protein eS26, conserved siteConserved Site
EA [auth c]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
EA [auth c]IPR000592Small ribosomal subunit protein eS27Family
EA [auth c]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
FA [auth d]IPR028626Ribosomal protein eS28 conserved siteConserved Site
FA [auth d]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
FA [auth d]IPR000289Small ribosomal subunit protein eS28Family
GA [auth e]IPR001209Small ribosomal subunit protein uS14Family
GA [auth e]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
GA [auth e]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
GA [auth e]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
HA [auth f]IPR006846Small ribosomal subunit protein eS30Family
IA [auth g]IPR019954Ubiquitin conserved siteConserved Site
IA [auth g]IPR000626Ubiquitin-like domainDomain
IA [auth g]IPR038582Small ribosomal subunit protein eS31 eukaryotic-type superfamilyHomologous Superfamily
IA [auth g]IPR002906Small ribosomal subunit protein eS31Domain
IA [auth g]IPR019956Ubiquitin domainDomain
IA [auth g]IPR050158Ubiquitin and ubiquitin-likeFamily
IA [auth g]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
IA [auth g]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
JA [auth h]IPR019775WD40 repeat, conserved siteConserved Site
JA [auth h]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
JA [auth h]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
JA [auth h]IPR045223Small ribosomal subunit protein RACK1-likeFamily
JA [auth h]IPR001680WD40 repeatRepeat
JA [auth h]IPR020472G-protein beta WD-40 repeatRepeat
KA [auth o]IPR027512Eukaryotic translation initiation factor 3 subunit AFamily
KA [auth o]IPR000717Proteasome component (PCI) domainDomain
KA [auth o]IPR054711eIF3a, PCI domain, TPR-like regionDomain
LA [auth p]IPR013979Translation initiation factor, beta propellor-like domainDomain
LA [auth p]IPR034363eIF3B, RNA recognition motifDomain
LA [auth p]IPR000504RNA recognition motif domainDomain
LA [auth p]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
LA [auth p]IPR011400Eukaryotic translation initiation factor 3 subunit BFamily
LA [auth p]IPR035979RNA-binding domain superfamilyHomologous Superfamily
LA [auth p]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
MA [auth q]IPR008905Eukaryotic translation initiation factor 3 subunit C, N-terminal domainDomain
MA [auth q]IPR027516Eukaryotic translation initiation factor 3 subunit CFamily
MA [auth q]IPR000717Proteasome component (PCI) domainDomain
NA [auth i]IPR018104Translation initiation factor 1A (eIF-1A), conserved siteConserved Site
NA [auth i]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
NA [auth i]IPR006196RNA-binding domain, S1, IF1 typeDomain
NA [auth i]IPR001253Translation initiation factor 1A (eIF-1A)Family
OA [auth m]IPR005874Eukaryotic translation initiation factor SUI1Family
OA [auth m]IPR001950SUI1 domainDomain
OA [auth m]IPR036877SUI1 domain superfamilyHomologous Superfamily
PA [auth t],
SA [auth s]
IPR013906Eukaryotic translation initiation factor 3 subunit JFamily
PA [auth t],
SA [auth s]
IPR023194Eukaryotic translation initiation factor 3-like domain superfamilyHomologous Superfamily
RA [auth k]IPR007209RNase L inhibitor RLI-like, possible metal-binding domainDomain
RA [auth k]IPR017871ABC transporter-like, conserved siteConserved Site
RA [auth k]IPR003439ABC transporter-like, ATP-binding domainDomain
RA [auth k]IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved siteConserved Site
RA [auth k]IPR003593AAA+ ATPase domainDomain
RA [auth k]IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainDomain
RA [auth k]IPR013283RLI1Family
RA [auth k]IPR034348RLI, domain 1Domain
RA [auth k]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily